RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 SLC15A1P46059 708 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 ZNF121P58317 390 aaPredicted RBP12.49□□□□□ -0.41
RAB40B-202ENST00000538809 PAX2Q02962 417 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 KLHL12Q53G59 568 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 SFRP4Q6FHJ7 346 aaPredicted RBP12.49□□□□□ -0.41
RAB40B-202ENST00000538809 DCDC5Q6ZRR9 648 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 ZNF826PQ6ZT77 177 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 ASRGL1Q7L266 308 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 NLRC3Q7RTR2 1065 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 SLC16A9Q7RTY1 509 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 BCL6BQ8N143 479 aaPredicted RBP12.49□□□□□ -0.41
RAB40B-202ENST00000538809 SIGLECL1Q8N7X8 197 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 ZDHHC22Q8N966 263 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 ERGIC1Q969X5 290 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 REEP6Q96HR9 211 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 PLEKHA8Q96JA3 519 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 JMJD8Q96S16 334 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 C1orf123Q9NWV4 160 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 ZNF319Q9P2F9 582 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 RNF7Q9UBF6 113 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 NUP50Q9UKX7 468 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 KLHDC2Q9Y2U9 406 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 AP4S1Q9Y587 144 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 hCG_38984A0A1B0GV85 526 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 C3orf80F5H4A9 247 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 MITFO75030 526 aaPredicted RBP12.48□□□□□ -0.41
RAB40B-202ENST00000538809 LYNP07948 512 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 H2BFMP0C1H6 154 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 FPR2P25090 351 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 EPHA2P29317 976 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 ESRRGP62508 458 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 EFNB1P98172 346 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 FAM3AP98173 230 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 PAX8Q06710 450 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 PTGES3Q15185 160 aaKnown RBP12.48□□□□□ -0.41
RAB40B-202ENST00000538809 C1orf146Q5VVC0 180 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 KDM4DQ6B0I6 523 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 BTNL3Q6UXE8 466 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 ZNF454Q8N9F8 522 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 FAM216AQ8WUB2 273 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 SGK3Q96BR1 496 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 TECTBQ96PL2 329 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 PPP1R3EQ9H7J1 279 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 TVP23BQ9NYZ1 205 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 KIF17Q9P2E2 1029 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 CTSZQ9UBR2 303 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 CLN8Q9UBY8 286 aa12.48□□□□□ -0.41
RAB40B-202ENST00000538809 TRAV40A0A0B4J280 105 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-202ENST00000538809 hCG_1807616A0A1W2PRN6 198 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 ANKRD30BLA7E2S9 258 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 LGALS8O00214 317 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 PRKYO43930 277 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 APOC1P02654 83 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 IGHV4-38-2P0DP08 117 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 ALOX5APP20292 161 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 CPT2P23786 658 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 FASP25445 335 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 DDOSTP39656 456 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 RPS7P62081 194 aaKnown RBP12.47□□□□□ -0.41
RAB40B-202ENST00000538809 UBA52P62987 128 aaKnown RBP12.47□□□□□ -0.41
RAB40B-202ENST00000538809 APOFQ13790 326 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 OR8B8Q15620 311 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 SNAPC1Q16533 368 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 SLX4IPQ5VYV7 408 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 WDR25Q64LD2 544 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-202ENST00000538809 AMIGO2Q86SJ2 522 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 WDR86Q86TI4 376 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 THEM6Q8WUY1 208 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 RAB40AQ8WXH6 277 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 LRTOMTQ8WZ04 291 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 DACT3Q96B18 629 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-202ENST00000538809 PGAM5Q96HS1 289 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 DUX5Q96PT3 197 aa12.47□□□□□ -0.41
RAB40B-202ENST00000538809 NUDT16L1Q9BRJ7 211 aaKnown RBP12.47□□□□□ -0.41
RAB40B-202ENST00000538809 SOX21Q9Y651 276 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-202ENST00000538809 ZAR1LA6NP61 321 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 C22orf46C9J442 243 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 G3V2T6 193 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 PHYHO14832 338 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 EGR1P18146 543 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 C12orf73Q69YU5 71 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 LRRN1Q6UXK5 716 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 ZNF841Q6ZN19 808 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 GCSAMQ8N6F7 178 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 PLPP7Q8NBV4 271 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 OR52H1Q8NGJ2 320 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 OR8S1Q8NH09 359 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 GCDHQ92947 438 aaPredicted RBP12.46□□□□□ -0.41
RAB40B-202ENST00000538809 ZNF48Q96MX3 618 aaPredicted RBP12.46□□□□□ -0.41
RAB40B-202ENST00000538809 TEAD3Q99594 435 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 TEX12Q9BXU0 123 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 YIPF3Q9GZM5 350 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 OR10A2Q9H208 303 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 SP140LQ9H930 580 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 KRT84Q9NSB2 600 aa12.46□□□□□ -0.41
RAB40B-202ENST00000538809 IGHV3OR15-7A0A075B7D8 119 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 OOEPA6NGQ2 149 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 DNAJC9-AS1A6NH13 148 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 PRR32B1ATL7 298 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms