RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 MCEMP1Q8IX19 187 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 ZNF100Q8IYN0 542 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 CHST4Q8NCG5 386 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 OR4S1Q8NGB4 309 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 THRSPQ92748 146 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 CMTM3Q96MX0 182 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 MOB1AQ9H8S9 216 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 ZDHHC11Q9H8X9 412 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 ACKR4Q9NPB9 350 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 DIABLOQ9NR28 239 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 NBASA2RRP1 2371 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 PTPRQQ9UMZ3 2332 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 ICE1Q9Y2F5 2266 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 CADP27708 2225 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 IGKV3D-15A0A087WSY6 115 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 LDLRAD4O15165 306 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 CSN2P05814 226 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 YES1P07947 543 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-205ENST00000538545 GNB3P16520 340 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 FOXC1Q12948 553 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 RAB35Q15286 201 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 LINC00303Q3SY05 128 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 GVQW1Q8N7I0 195 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 SPTSSAQ969W0 71 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 APH1AQ96BI3 265 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 TAAR6Q96RI8 345 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 DPAGT1Q9H3H5 408 aa12.31□□□□□ -0.44
ACTN1-205ENST00000538545 LOC100509620A0A075B734 347 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 MEGF11A6BM72 1044 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 MPIG6BO95866 241 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 CTSSP25774 331 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 ZNF529Q6P280 563 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 OR56B4Q8NH76 319 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 NUDCD2Q8WVJ2 157 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 REEP6Q96HR9 211 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 METTL17Q9H7H0 456 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-205ENST00000538545 B3GNT2Q9NY97 397 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 CHD8Q9HCK8 2581 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 A0A0A6YYD4 124 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 CENPXA8MT69 81 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 LINC01387J3KSC0 135 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 DHRS3O75911 302 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 CD3DP04234 171 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 ZNF92Q03936 586 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 IGFBP7Q16270 282 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 CRIM1Q9NZV1 1036 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 ZNF581Q9P0T4 197 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 MRPS28Q9Y2Q9 187 aaKnown RBP12.3□□□□□ -0.44
ACTN1-205ENST00000538545 TIMM10BQ9Y5J6 103 aa12.3□□□□□ -0.44
ACTN1-205ENST00000538545 TLN1Q9Y490 2541 aaKnown RBP12.3□□□□□ -0.44
ACTN1-205ENST00000538545 ANKRD20A5PA0PJZ0 165 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 OR6C6A6NF89 314 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 SLC22A20A6NK97 555 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 M0QYG6 137 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 RAB27BO00194 218 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 ANGPTL7O43827 346 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 IGLV3-1P01715 115 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 EDN3P14138 238 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 CCL1P22362 96 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 HLA-DMAP28067 261 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 SCRN3Q0VDG4 424 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 RIPPLY2Q5TAB7 128 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 NKAIN3Q8N8D7 197 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 C1orf147Q96MC9 270 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-205ENST00000538545 MRI1Q9BV20 369 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 SELENOIQ9C0D9 397 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 ELL3Q9HB65 397 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-205ENST00000538545 ESPL1Q14674 2120 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 C3orf80F5H4A9 247 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 SOCS1O15524 211 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 HPXP02790 462 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 PRSS3P35030 304 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 QRFPP83859 136 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 KISS1Q15726 138 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 BAIAP2L2Q6UXY1 529 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 OR4C16Q8NGL9 310 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 TMEM45BQ96B21 275 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 TRIB1Q96RU8 372 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 BCO1Q9HAY6 547 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 ZNF629Q9UEG4 869 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-205ENST00000538545 SPTA1P02549 2419 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 FAM230AA0A1W2PPH8 454 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 C5orf49A4QMS7 147 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 HMX3A6NHT5 357 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 ARPC1BO15143 372 aaKnown RBP12.29□□□□□ -0.44
ACTN1-205ENST00000538545 RBBP9O75884 186 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 CD37P11049 281 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 FCGR2AP12318 317 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 GTF2F2P13984 249 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 CFPP27918 469 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 AGTR1P30556 359 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 MNDAP41218 407 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 HLXQ14774 488 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-205ENST00000538545 KCNJ8Q15842 424 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 OR52W1Q6IF63 320 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 CREB3L1Q96BA8 519 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 SEH1LQ96EE3 360 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 EMC3Q9P0I2 261 aa12.29□□□□□ -0.44
ACTN1-205ENST00000538545 ZNF221Q9UK13 617 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms