RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 SEH1LQ96EE3 360 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 FAM71F1Q96KD3 344 aaPredicted RBP6.99□□□□□ -1.29
USP28-203ENST00000537490 NMNAT2Q9BZQ4 307 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 TRIM15Q9C019 465 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 PPP1R3EQ9H7J1 279 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 BEX1Q9HBH7 125 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 ACOXLQ9NUZ1 547 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 VNN3Q9NY84 501 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 PDP1Q9P0J1 537 aaPredicted RBP6.99□□□□□ -1.29
USP28-203ENST00000537490 DUX4Q9UBX2 424 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 TAGLN3Q9UI15 199 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 DOCK11Q5JSL3 2073 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 IGHV1-69DA0A0B4J2H0 117 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.98□□□□□ -1.29
USP28-203ENST00000537490 A0A0U1RQK1 487 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 DHRS12A0PJE2 317 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 CLPSL1A2RUU4 121 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 ANKRD30BLA7E2S9 258 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 ZNF878C9JN71 531 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 TBX1O43435 398 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 XRCC2O43543 280 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 CCNB2O95067 398 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 NDUFA7O95182 113 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 SOX14O95416 240 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 IGHV1-69P01742 117 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 SPI1P17947 270 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 AMY2BP19961 511 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 ATP6V1B2P21281 511 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 DDOSTP39656 456 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 MAGEA2P43356 314 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 SLC25A1P53007 311 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 CSNK2BP67870 215 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 PDCD1Q15116 288 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 KLHL12Q53G59 568 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 PDLIM3Q53GG5 364 aaPredicted RBP6.98□□□□□ -1.29
USP28-203ENST00000537490 LINC01590Q5TEZ4 76 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 METTL11BQ5VVY1 283 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 TEX36Q5VZQ5 186 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 OLFML2AQ68BL7 652 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 C17orf107Q6ZR85 190 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 SLC16A9Q7RTY1 509 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 PRSS45Q7RTY3 260 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 CPLX4Q7Z7G2 160 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 PDZD9Q8IXQ8 264 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 LINC00471Q8N535 108 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 AQP11Q8NBQ7 271 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 OR8S1Q8NH09 359 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 LRRC29Q8WV35 223 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 GATAD2BQ8WXI9 593 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 CCL13Q99616 98 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 CNTD2Q9H8S5 307 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 RNPEPL1Q9HAU8 725 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 TRIM36Q9NQ86 728 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 TBC1D23Q9NUY8 699 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 ARMC1Q9NVT9 282 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 C14orf119Q9NWQ9 140 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 ZNF319Q9P2F9 582 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 KAAG1Q9UBP8 84 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 POMT1Q9Y6A1 747 aa6.98□□□□□ -1.29
USP28-203ENST00000537490 hCG_38984A0A1B0GV85 526 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 TCRBV5S2A0A599 114 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.97□□□□□ -1.29
USP28-203ENST00000537490 GPR137BO60478 399 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 ECDO95905 644 aaPredicted RBP6.97□□□□□ -1.29
USP28-203ENST00000537490 IGHV4-59P01825 116 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 ANXA2P07355 339 aaKnown RBP6.97□□□□□ -1.29
USP28-203ENST00000537490 SLC15A1P46059 708 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 CX3CR1P49238 355 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 GRB2P62993 217 aaKnown RBP6.97□□□□□ -1.29
USP28-203ENST00000537490 PRB3Q04118 309 aaPredicted RBP6.97□□□□□ -1.29
USP28-203ENST00000537490 MZT1Q08AG7 82 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 EIF2B1Q14232 305 aaKnown RBP6.97□□□□□ -1.29
USP28-203ENST00000537490 MICAQ29983 383 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 WDR38Q5JTN6 314 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 C16orf89Q6UX73 402 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 WDR82Q6UXN9 313 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 FAM57BQ71RH2 274 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 RHOUQ7L0Q8 258 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 DPY19L4Q7Z388 723 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 LY6G5BQ8NDX9 201 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 OR1M1Q8NGA1 313 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 OR6K6Q8NGW6 343 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 TBC1D15Q8TC07 691 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 SSMEM1Q8WWF3 244 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 ST8SIA4Q92187 359 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 REEP6Q96HR9 211 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 AMELYQ99218 206 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 CITED1Q99966 193 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 ABHD6Q9BV23 337 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 DGCR6LQ9BY27 220 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 OPA3Q9H6K4 179 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 MED20Q9H944 212 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 ACTR3BQ9P1U1 418 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 KIF17Q9P2E2 1029 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 RPUSD1Q9UJJ7 312 aaKnown RBP6.97□□□□□ -1.29
USP28-203ENST00000537490 BAIAP2Q9UQB8 552 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 RHBDD3Q9Y3P4 386 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 U3KQV3 271 aa6.97□□□□□ -1.29
USP28-203ENST00000537490 FAM183AA6NL82 134 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 ACOT8O14734 319 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms