RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 DAPL1A0PJW8 107 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 LRP5LA4QPB2 252 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ACOD1A6NK06 481 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 SNTNA6NMZ2 147 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 LOC110117498-PIK3R3F6TDL0 507 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 FAM20BO75063 409 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 SULT1C4O75897 302 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 LY6G6DO95868 133 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 KRT8P05787 483 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 TACSTD2P09758 323 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 USF1P22415 310 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 TNFSF4P23510 183 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 CFL1P23528 166 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 IL2RGP31785 369 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 PSMB10P40306 273 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 PMELP40967 661 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 OR12D2P58182 307 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ACTC1P68032 377 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ACTA1P68133 377 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 IL18R1Q13478 541 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 LHFPL3Q86UP9 236 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ELMOD2Q8IZ81 293 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ACBD7Q8N6N7 88 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 SETD9Q8NE22 299 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 OR51E1Q8TCB6 317 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 CCL17Q92583 94 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ADAT1Q9BUB4 502 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 EGLN1Q9GZT9 426 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 VCXQ9H320 206 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 GCM1Q9NP62 436 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 GPR84Q9NQS5 396 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 GNG8Q9UK08 70 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 OR52A1Q9UKL2 312 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 GTF2A1LQ9UNN4 478 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 RHBDD3Q9Y3P4 386 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 RPL36Q9Y3U8 105 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 HSPE1-MOB4S4R3N1 261 aa9.56□□□□□ -0.88
TNFRSF1A-208ENST00000536194 LOC100289279A0A1B0GTE1 492 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 A0A1B0GTI1 187 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 H0YJX3 145 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 PPIHO43447 177 aaKnown RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 DDOSTP39656 456 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 CD200P41217 278 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 KIR3DL2P43630 455 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 GPR6P46095 362 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 TMEM33P57088 247 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 NANOS3P60323 173 aaKnown RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 HOXA4Q00056 320 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 RAB40BQ12829 278 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 GALEQ14376 348 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 OR8G1Q15617 311 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 TMEM249Q2WGJ8 235 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 HFEQ30201 348 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 WDR38Q5JTN6 314 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 AVPI1Q5T686 147 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 BCL2L15Q5TBC7 163 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 PRAMEF6Q5VXH4 476 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 Q71RC1 249 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 WDR86Q86TI4 376 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 BIVMQ86UB2 503 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 CATSPERDQ86XM0 798 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 C8orf59Q8N0T1 100 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 PRSS35Q8N3Z0 413 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ZNF420Q8TAQ5 688 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 PELI1Q96FA3 418 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 FAM71F1Q96KD3 344 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 C4orf36Q96KX1 117 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ALG8Q9BVK2 526 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 FGF23Q9GZV9 251 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 NARFLQ9H6Q4 476 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 MOB1AQ9H8S9 216 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ISG20L2Q9H9L3 353 aaKnown RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 FGF20Q9NP95 211 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ERVK13-1Q9NX77 482 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ZNF391Q9UJN7 358 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 PPP1R3CQ9UQK1 317 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 WIPI2Q9Y4P8 454 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 PCDHGB1Q9Y5G3 927 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 SNX5Q9Y5X3 404 aa9.55□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ANKRD30BLA7E2S9 258 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 CLDN25C9JDP6 229 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 P2RY10O00398 339 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 GMDSO60547 372 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 PTBP3O95758 552 aaKnown RBP9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 FADS2O95864 444 aaKnown RBP9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 LIMS3P0CW19 117 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 LIMS4P0CW20 117 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 IGHV4-31P0DP07 118 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 TNFRSF1AP19438 455 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 GATA4P43694 442 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 SRP9P49458 86 aaKnown RBP9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 MVKQ03426 396 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 MPPED2Q15777 294 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 KLHL22Q53GT1 634 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 Q6ZSR3 168 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 KRT74Q7RTS7 529 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 MOGAT3Q86VF5 341 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 CELF2-AS1Q8N7Q2 184 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 PLPP7Q8NBV4 271 aa9.54□□□□□ -0.88
TNFRSF1A-208ENST00000536194 ZNF540Q8NDQ6 660 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms