RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 UNC93AQ86WB7 457 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 LINC00304Q8N9R0 145 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 FBXO36Q8NEA4 188 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 UQCC2Q9BRT2 126 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 TMEM175Q9BSA9 504 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 ZNF442Q9H7R0 627 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 ZNF257Q9Y2Q1 563 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 TSSC4Q9Y5U2 329 aaPredicted RBP2.46□□□□□ -2.02
PRKDC-205ENST00000535375 MROH7Q68CQ1 1323 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 OR6C74A6NCV1 312 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 NVLO15381 856 aaKnown RBP2.45□□□□□ -2.02
PRKDC-205ENST00000535375 CHMP2AO43633 222 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 ZNF207O43670 478 aaKnown RBP2.45□□□□□ -2.02
PRKDC-205ENST00000535375 SPOPO43791 374 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 SLC16A7O60669 478 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 CTNSO60931 367 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 YIF1AO95070 293 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 GLAP06280 429 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 STAG3L2P0CL84 134 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 CD37P11049 281 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 OPRK1P41145 380 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 GFERP55789 205 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 OR2B8PP59922 312 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 CDC20Q12834 499 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 DGCR6Q14129 220 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 TFDP2Q14188 446 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 ZNF266Q14584 549 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 CDKL3Q8IVW4 592 aaPredicted RBP2.45□□□□□ -2.02
PRKDC-205ENST00000535375 SNX31Q8N9S9 440 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 OR51L1Q8NGJ5 315 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 OR4A15Q8NGL6 344 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 RTN4IP1Q8WWV3 396 aaPredicted RBP2.45□□□□□ -2.02
PRKDC-205ENST00000535375 BAALCQ8WXS3 180 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 PTX4Q96A99 478 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 CIDECQ96AQ7 238 aaPredicted RBP2.45□□□□□ -2.02
PRKDC-205ENST00000535375 DYNLL2Q96FJ2 89 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 FAM19A4Q96LR4 140 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 TIMM17AQ99595 171 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 SLIRPQ9GZT3 109 aaKnown RBP2.45□□□□□ -2.02
PRKDC-205ENST00000535375 KIR3DX1Q9H7L2 352 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 EDA2RQ9HAV5 297 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 ZMAT5Q9UDW3 170 aaKnown RBP2.45□□□□□ -2.02
PRKDC-205ENST00000535375 TRMT112Q9UI30 125 aaKnown RBP2.45□□□□□ -2.02
PRKDC-205ENST00000535375 DDX19BQ9UMR2 479 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 UBIAD1Q9Y5Z9 338 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 S4R3C0 116 aa2.45□□□□□ -2.02
PRKDC-205ENST00000535375 IGHV1OR15-9A0A0B4J2B8 117 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 A0A0B4J2E0 115 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 LOC100653049A0A140TA62 436 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 GSTTP1A0A1W2PQM5 241 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 GMDSO60547 372 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 KRT34O76011 436 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 MBP02144 154 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 IVLP07476 585 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 IVDP26440 423 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 CD70P32970 193 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 RBM34P42696 430 aaKnown RBP2.44□□□□□ -2.02
PRKDC-205ENST00000535375 UBE2E1P51965 193 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 NDUFA8P51970 172 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 YWHAEP62258 255 aaKnown RBP2.44□□□□□ -2.02
PRKDC-205ENST00000535375 WDR43Q15061 677 aaKnown RBP eCLIP2.44□□□□□ -2.02
PRKDC-205ENST00000535375 SLC25A25Q6KCM7 469 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 KRTAP13-1Q8IUC0 172 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 TMEM104Q8NE00 496 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 OR6N1Q8NGY5 312 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 OR10G6Q8NH81 332 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 TCP10LQ8TDR4 215 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 OR8D1Q8WZ84 308 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 NEURL3Q96EH8 262 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 UBE2E2Q96LR5 201 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 CHID1Q9BWS9 393 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 ZNF717Q9BY31 904 aaPredicted RBP2.44□□□□□ -2.02
PRKDC-205ENST00000535375 GAL3ST2Q9H3Q3 398 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 RGS18Q9NS28 235 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 TREX1Q9NSU2 369 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 KPTNQ9Y664 436 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 DHX57Q6P158 1386 aaKnown RBP2.44□□□□□ -2.02
PRKDC-205ENST00000535375 GPR179Q6PRD1 2367 aa2.44□□□□□ -2.02
PRKDC-205ENST00000535375 IGHV1-69DA0A0B4J2H0 117 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 A0A1W2PRF3 423 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 A0A1W2PRM7 423 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 SYCE1LA8MT33 242 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 CENPXA8MT69 81 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 A8MUU9 505 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 FAM25EA8MYX2 175 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 BPY2O14599 106 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 RAD1O60671 282 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 SLC19A2O60779 497 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 REM1O75628 298 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 LCA5LO95447 670 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 ETHE1O95571 254 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 CCNE2O96020 404 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 APCSP02743 223 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 OR8U9P0C7N5 309 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 THRAP10827 490 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 DTYMKP23919 212 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 HTR1DP28221 377 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 CD34P28906 385 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 RAB7AP51149 207 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 CDKN2DP55273 166 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms