RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 ANKDD1AQ495B1 522 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 TMEM225Q6GV28 225 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 TMIGD1Q6UXZ0 262 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 ACP7Q6ZNF0 438 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 OOSP2Q86WS3 158 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 RPRMLQ8N4K4 120 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 ARIH2OSQ8N7S6 290 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 ACBD4Q8NC06 268 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 OR10G3Q8NGC4 313 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 LCN9Q8WX39 176 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 SRSF12Q8WXF0 261 aaKnown RBP4.06□□□□□ -1.76
CASP4-213ENST00000534356 PIGCQ92535 297 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 NRIP2Q9BQI9 281 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 ERP44Q9BS26 406 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 SLC25A39Q9BZJ4 359 aaPredicted RBP4.06□□□□□ -1.76
CASP4-213ENST00000534356 SLC7A5P2Q9GIP4 190 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 SRMSQ9H3Y6 488 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 KIR3DX1Q9H7L2 352 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 MCCC2Q9HCC0 563 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 UFSP2Q9NUQ7 469 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 PARVAQ9NVD7 372 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 SEC14L3Q9UDX4 400 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 POLDIP2Q9Y2S7 368 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 TIMM10BQ9Y5J6 103 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 FREM3P0C091 2139 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 ATRQ13535 2644 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 STAB1Q9NY15 2570 aa4.06□□□□□ -1.76
CASP4-213ENST00000534356 KIAA1549Q9HCM3 1950 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 SONP18583 2426 aaKnown RBP4.05□□□□□ -1.76
CASP4-213ENST00000534356 ARID1AO14497 2285 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 A0A0G2JLM5 398 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 MGAT4DA6NG13 374 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 ARPC3O15145 178 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 RGS16O15492 202 aaPredicted RBP4.05□□□□□ -1.76
CASP4-213ENST00000534356 SLC19A2O60779 497 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 PRB2P02812 416 aaPredicted RBP4.05□□□□□ -1.76
CASP4-213ENST00000534356 OPN1MWP04001 364 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 OPN1MW2P0DN77 364 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 OPN1MW3P0DN78 364 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 CCNCP24863 283 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 SSR1P43307 286 aaKnown RBP4.05□□□□□ -1.76
CASP4-213ENST00000534356 PKNOX1P55347 436 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 ARG2P78540 354 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 PAFAH1B3Q15102 231 aaKnown RBP4.05□□□□□ -1.76
CASP4-213ENST00000534356 NRF1Q16656 503 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 KRTAP13-3Q3SY46 172 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 TIGD3Q6B0B8 471 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 DOLPP1Q86YN1 238 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 BBS5Q8N3I7 341 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 OR5AR1Q8NGP9 310 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 BLOC1S5Q8TDH9 187 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 EFHD2Q96C19 240 aaPredicted RBP4.05□□□□□ -1.76
CASP4-213ENST00000534356 IMP4Q96G21 291 aaKnown RBP4.05□□□□□ -1.76
CASP4-213ENST00000534356 NPAS2Q99743 824 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 NAT9Q9BTE0 207 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 CHRDL1Q9BU40 450 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 ZSCAN5AQ9BUG6 496 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 HAUS4Q9H6D7 363 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 COPS3Q9UNS2 423 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 ARL5AQ9Y689 179 aa4.05□□□□□ -1.76
CASP4-213ENST00000534356 A6NDX4 124 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 FAM166BA8MTA8 275 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 TNFSF13O75888 250 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 AP2A1O95782 977 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 MOSP00540 346 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 AGTP01019 485 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 STATHP02808 62 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 CHTF8P0CG12 524 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 COX6A1P12074 109 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 PCK1P35558 622 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 RFC3P40938 356 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 ARFIP1P53367 373 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 RPL26P61254 145 aaKnown RBP4.04□□□□□ -1.76
CASP4-213ENST00000534356 XIAPP98170 497 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 BOLA3Q53S33 107 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 TFDP3Q5H9I0 405 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 CCDC122Q5T0U0 273 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 XKRXQ6PP77 449 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 SPESP1Q6UW49 350 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 KDELC1Q6UW63 502 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 CCDC50Q8IVM0 306 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 DNAAF3Q8N9W5 541 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 Q8N9W7 124 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 WFDC11Q8NEX6 87 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 ARPC1AQ92747 370 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 EMG1Q92979 244 aaKnown RBP4.04□□□□□ -1.76
CASP4-213ENST00000534356 CMTM7Q96FZ5 175 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 SECISBP2Q96T21 854 aaKnown RBP4.04□□□□□ -1.76
CASP4-213ENST00000534356 OR52A5Q9H2C5 316 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 RBKSQ9H477 322 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 EURLQ9NYK6 297 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 RPL26L1Q9UNX3 145 aaKnown RBP4.04□□□□□ -1.76
CASP4-213ENST00000534356 ZNF835Q9Y2P0 537 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 HYOU1Q9Y4L1 999 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 HEY1Q9Y5J3 304 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 ATP6V1DQ9Y5K8 247 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 HEATR5AQ86XA9 2040 aa4.04□□□□□ -1.76
CASP4-213ENST00000534356 PHF3Q92576 2039 aaKnown RBP4.04□□□□□ -1.76
CASP4-213ENST00000534356 MED12Q93074 2177 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 NACAE9PAV3 2078 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms