RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 LYNP07948 512 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 FAM3AP98173 230 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 MZT1Q08AG7 82 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 APOFQ13790 326 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 DCDC5Q6ZRR9 648 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 USP43Q70EL4 1123 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 TIGD4Q8IY51 512 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 BCL6BQ8N143 479 aaPredicted RBP8.72□□□□□ -1.01
CAPN1-225ENST00000533704 SIGLECL1Q8N7X8 197 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 SPERTQ8NA61 448 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 RNF133Q8WVZ7 376 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 RAB40AQ8WXH6 277 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 GCDHQ92947 438 aaPredicted RBP8.72□□□□□ -1.01
CAPN1-225ENST00000533704 SGK3Q96BR1 496 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 DUX5Q96PT3 197 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 NUDT16L1Q9BRJ7 211 aaKnown RBP8.72□□□□□ -1.01
CAPN1-225ENST00000533704 PAPOLGQ9BWT3 736 aaKnown RBP8.72□□□□□ -1.01
CAPN1-225ENST00000533704 CADM1Q9BY67 442 aaKnown RBP8.72□□□□□ -1.01
CAPN1-225ENST00000533704 MARCH7Q9H992 704 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 C14orf119Q9NWQ9 140 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 TVP23BQ9NYZ1 205 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 NUP50Q9UKX7 468 aa8.72□□□□□ -1.01
CAPN1-225ENST00000533704 POLR3KQ9Y2Y1 108 aaPredicted RBP8.72□□□□□ -1.01
CAPN1-225ENST00000533704 IGHV3OR15-7A0A075B7D8 119 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 LGALS8O00214 317 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 GSC2O15499 205 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 PRODHO43272 600 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 ADAM20O43506 726 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 GYPAP02724 150 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 MRPL3P09001 348 aaKnown RBP8.71□□□□□ -1.02
CAPN1-225ENST00000533704 IGHV4-38-2P0DP08 117 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 GNALP38405 381 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 DDOSTP39656 456 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 OPRL1P41146 370 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 GSK3AP49840 483 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 HCCSP53701 268 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 CDK5Q00535 292 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 POU4F2Q12837 409 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 KCNJ8Q15842 424 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 SNAPC1Q16533 368 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 KLF17Q5JT82 389 aaPredicted RBP8.71□□□□□ -1.02
CAPN1-225ENST00000533704 WDR25Q64LD2 544 aaPredicted RBP8.71□□□□□ -1.02
CAPN1-225ENST00000533704 LRRN1Q6UXK5 716 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 KRT77Q7Z794 578 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 PARP8Q8N3A8 854 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF454Q8N9F8 522 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 OR52H1Q8NGJ2 320 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 OTOSQ8NHW6 89 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 FAM216AQ8WUB2 273 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 ZFAND2BQ8WV99 257 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 SPSB4Q96A44 273 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 TTTY10Q9BZA0 68 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 MS4A7Q9GZW8 240 aaPredicted RBP8.71□□□□□ -1.02
CAPN1-225ENST00000533704 ESM1Q9NQ30 184 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 PAPOLBQ9NRJ5 636 aaKnown RBP8.71□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF319Q9P2F9 582 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 LAMP5Q9UJQ1 280 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 KLHDC2Q9Y2U9 406 aa8.71□□□□□ -1.02
CAPN1-225ENST00000533704 TENM1Q9UKZ4 2725 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 TRAV38-1A0A0B4J264 116 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 TRAV40A0A0B4J280 105 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 hCG_38984A0A1B0GV85 526 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 OOEPA6NGQ2 149 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 PSMD9O00233 223 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 PHYHO14832 338 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 EGR1P18146 543 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 CFL1P23528 166 aaKnown RBP8.7□□□□□ -1.02
CAPN1-225ENST00000533704 CPT2P23786 658 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 CRISP1P54107 249 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 GMFBP60983 142 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 CSNK2BP67870 215 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 PAX8Q06710 450 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 SLC35D3Q5M8T2 416 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 KCTD8Q6ZWB6 473 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 PRSS45Q7RTY3 260 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 COMMD2Q86X83 199 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 ZDHHC22Q8N966 263 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 PAPD5Q8NDF8 572 aaKnown RBP8.7□□□□□ -1.02
CAPN1-225ENST00000533704 CSNK2A3Q8NEV1 391 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 OR5K1Q8NHB7 308 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 LRRC29Q8WV35 223 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 MICU1Q9BPX6 476 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 PPP1R3EQ9H7J1 279 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 NTN4Q9HB63 628 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 SLC25A19Q9HC21 320 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 ERVK-18Q9QC07 812 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 CTSZQ9UBR2 303 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 RHBDD3Q9Y3P4 386 aa8.7□□□□□ -1.02
CAPN1-225ENST00000533704 SOX21Q9Y651 276 aaPredicted RBP8.7□□□□□ -1.02
CAPN1-225ENST00000533704 KIR2DS1A0A191URI9 304 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 ANXA2P2A6NMY6 339 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 C22orf46C9J442 243 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 M0R129 80 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 ENSAO43768 121 aaKnown RBP8.69□□□□□ -1.02
CAPN1-225ENST00000533704 MITFO75030 526 aaPredicted RBP8.69□□□□□ -1.02
CAPN1-225ENST00000533704 FSTL3O95633 263 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 PTBP3O95758 552 aaKnown RBP8.69□□□□□ -1.02
CAPN1-225ENST00000533704 SLC2A5P22732 501 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 RASSF2P50749 326 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 DAPP51397 102 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms