RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 IL4I1Q96RQ9 567 aa19.29■□□□□ 0.68
CAPN1-222ENST00000532285 MDFIQ99750 246 aa19.29■□□□□ 0.68
CAPN1-222ENST00000532285 MROQ9BYG7 248 aa19.29■□□□□ 0.68
CAPN1-222ENST00000532285 RIBC2Q9H4K1 309 aa19.29■□□□□ 0.68
CAPN1-222ENST00000532285 TMEM165Q9HC07 324 aa19.29■□□□□ 0.68
CAPN1-222ENST00000532285 UFSP2Q9NUQ7 469 aa19.29■□□□□ 0.68
CAPN1-222ENST00000532285 C14orf119Q9NWQ9 140 aa19.29■□□□□ 0.68
CAPN1-222ENST00000532285 PPIAL4EA0A075B759 164 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 ACOD1A6NK06 481 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 F5H0A9 414 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-222ENST00000532285 PPIAL4DF5H284 164 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 H3BNX3 289 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 J3QLI3 93 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 FAM20BO75063 409 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 ZNF205O95201 554 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 PPIAL4FP0DN26 164 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 MPPED2Q15777 294 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 SNCBQ16143 134 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 TEX29Q8N6K0 151 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 CSNK2A3Q8NEV1 391 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 ZNF391Q9UJN7 358 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 PPIAL4AQ9Y536 164 aa19.28■□□□□ 0.68
CAPN1-222ENST00000532285 PPIAL4CA0A0B4J2A2 164 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 CEACAM18A8MTB9 384 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 ZNF254O75437 659 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 DCTDP32321 178 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 POLR2IP36954 125 aaKnown RBP19.27■□□□□ 0.68
CAPN1-222ENST00000532285 ROM1Q03395 351 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 ZNF679Q8IYX0 411 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 FTMTQ8N4E7 242 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 OR8S1Q8NH09 359 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 DVL3Q92997 716 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-222ENST00000532285 MNTQ99583 582 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 HAO2Q9NYQ3 351 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 RNF7Q9UBF6 113 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 MIOXQ9UGB7 285 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 POLR3KQ9Y2Y1 108 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-222ENST00000532285 ORC6Q9Y5N6 252 aa19.27■□□□□ 0.68
CAPN1-222ENST00000532285 WNT2P09544 360 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 ZFP36P26651 326 aaKnown RBP19.26■□□□□ 0.67
CAPN1-222ENST00000532285 OR8B8Q15620 311 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 ZNF404Q494X3 552 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 ESCO2Q56NI9 601 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 RAB3IPQ96QF0 476 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-222ENST00000532285 OR8B4Q96RC9 309 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 TMEM246Q9BRR3 403 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 TMPRSS13Q9BYE2 586 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 ADGRL4Q9HBW9 690 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 METRNQ9UJH8 293 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 COPS3Q9UNS2 423 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 LRCH1Q9Y2L9 728 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 COL6A5A8TX70 2615 aa19.26■□□□□ 0.67
CAPN1-222ENST00000532285 TMEM269A0A1B0GVZ9 245 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 PSMD9O00233 223 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 PHYHO14832 338 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 PHF1O43189 567 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-222ENST00000532285 ALPLP05186 524 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 GRPP07492 148 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 GNALP38405 381 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 RIDAP52758 137 aaKnown RBP19.25■□□□□ 0.67
CAPN1-222ENST00000532285 FAM201AQ5SY85 155 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 SLC35F2Q8IXU6 374 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 OR8B12Q8NGG6 310 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 OR8J1Q8NGP2 316 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 USE1Q9NZ43 259 aa19.25■□□□□ 0.67
CAPN1-222ENST00000532285 WARS2Q9UGM6 360 aaKnown RBP19.25■□□□□ 0.67
CAPN1-222ENST00000532285 A0A0U1RQV5 110 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 A8MXK9 166 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 RPS2P15880 293 aaKnown RBP19.24■□□□□ 0.67
CAPN1-222ENST00000532285 CDC42P60953 191 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 SEC61A1P61619 476 aaKnown RBP19.24■□□□□ 0.67
CAPN1-222ENST00000532285 SCGB2A2Q13296 93 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 ZNF829Q3KNS6 432 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-222ENST00000532285 C1orf229Q6ZS94 237 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-222ENST00000532285 TMEM158Q8WZ71 300 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 ITFG2Q969R8 447 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 LYZL4Q96KX0 146 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 PAPOLGQ9BWT3 736 aaKnown RBP19.24■□□□□ 0.67
CAPN1-222ENST00000532285 METTL17Q9H7H0 456 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-222ENST00000532285 C1orf123Q9NWV4 160 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 CLN6Q9NWW5 311 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 FAM206AQ9NX38 181 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 IKZF2Q9UKS7 526 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 RHBDD3Q9Y3P4 386 aa19.24■□□□□ 0.67
CAPN1-222ENST00000532285 A6NLC8 198 aa19.23■□□□□ 0.67
CAPN1-222ENST00000532285 ZNF670-ZNF695F2Z2N8 137 aa19.23■□□□□ 0.67
CAPN1-222ENST00000532285 EI24O14681 340 aa19.23■□□□□ 0.67
CAPN1-222ENST00000532285 AVPP01185 164 aa19.23■□□□□ 0.67
CAPN1-222ENST00000532285 CXCR4P61073 352 aa19.23■□□□□ 0.67
CAPN1-222ENST00000532285 ZNF322Q6U7Q0 402 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-222ENST00000532285 DCDC5Q6ZRR9 648 aa19.23■□□□□ 0.67
CAPN1-222ENST00000532285 RFLNBQ8N5W9 214 aa19.23■□□□□ 0.67
CAPN1-222ENST00000532285 NEIL1Q96FI4 390 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-222ENST00000532285 SSBP3Q9BWW4 388 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-222ENST00000532285 C7orf69Q9H7B7 122 aa19.23■□□□□ 0.67
CAPN1-222ENST00000532285 ABCB9Q9NP78 766 aa19.23■□□□□ 0.67
CAPN1-222ENST00000532285 MPC1Q9Y5U8 109 aa19.23■□□□□ 0.67
CAPN1-222ENST00000532285 LOC105371242A0A075B767 164 aa19.22■□□□□ 0.67
CAPN1-222ENST00000532285 RNF212BA8MTL3 300 aa19.22■□□□□ 0.67
CAPN1-222ENST00000532285 PRR32B1ATL7 298 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms