RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 TCEAL5Q5H9L2 206 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 LCE3EQ5T5B0 92 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 CPTPQ5TA50 214 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 KDM4DQ6B0I6 523 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 Q6P435 159 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 EPGNQ6UW88 154 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 TMPRSS11AQ6ZMR5 421 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 Q6ZVH6 145 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 SLC30A8Q8IWU4 369 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 C19orf18Q8NEA5 215 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 OR10G2Q8NGC3 310 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 OR52P1PQ8NH57 321 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 OR5W2Q8NH69 310 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 RXFP2Q8WXD0 754 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 TCEAL3Q969E4 200 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 RCN3Q96D15 328 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 PDXPQ96GD0 296 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 CPB2Q96IY4 423 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 KCNS1Q96KK3 526 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 ZNF488Q96MN9 340 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 TEAD3Q99594 435 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 GABRG3Q99928 467 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 TMEM243Q9BU79 118 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 PRRG3Q9BZD7 231 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 OR52D1Q9H346 318 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 ANKHQ9HCJ1 492 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 RBFOX1Q9NWB1 397 aaKnown RBP1.87□□□□□ -2.11
CD44-234ENST00000531873 OR12D3Q9UGF7 316 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 GGA2Q9UJY4 613 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 SIGLEC9Q9Y336 463 aa1.87□□□□□ -2.11
CD44-234ENST00000531873 GPATCH8Q9UKJ3 1502 aaKnown RBP1.86□□□□□ -2.11
CD44-234ENST00000531873 JCADQ9P266 1359 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 BAZ2AQ9UIF9 1905 aaKnown RBP1.86□□□□□ -2.11
CD44-234ENST00000531873 TNS2Q63HR2 1409 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 IGKV6D-21A0A0A0MT36 114 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 LINC00854A0A1B0GVQ3 168 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 RAD51BO15315 384 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 CDC40O60508 579 aaKnown RBP eCLIP1.86□□□□□ -2.11
CD44-234ENST00000531873 ALOX12BO75342 701 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 REM1O75628 298 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 SC5DO75845 299 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 YIF1AO95070 293 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 SMC2O95347 1197 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 PTTG1O95997 202 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 RHOXF2BP0C7M4 288 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 PGAM1P18669 254 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 MAGP20916 626 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 BGNP21810 368 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 DTYMKP23919 212 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 MYL9P24844 172 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 HTR1DP28221 377 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 RPS9P46781 194 aaKnown RBP1.86□□□□□ -2.11
CD44-234ENST00000531873 PPOXP50336 477 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 UCNP55089 124 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 MLF1P58340 268 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 RPL31P62899 125 aaKnown RBP1.86□□□□□ -2.11
CD44-234ENST00000531873 CRADDP78560 199 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 CYP24A1Q07973 514 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 VAMP3Q15836 100 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 SMUG1Q53HV7 270 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 FAM78AQ5JUQ0 283 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 Q5W150 140 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 STEAP4Q687X5 459 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 ZFP2Q6ZN57 461 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 SLC16A13Q7RTY0 426 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 WDR86Q86TI4 376 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 LINC01551Q86U37 167 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 RBM45Q8IUH3 476 aaKnown RBP1.86□□□□□ -2.11
CD44-234ENST00000531873 WDFY1Q8IWB7 410 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 RIMKLAQ8IXN7 391 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 ST13P4Q8IZP2 240 aaPredicted RBP1.86□□□□□ -2.11
CD44-234ENST00000531873 PGAM4Q8N0Y7 254 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 TRIML2Q8N7C3 387 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 CYB561D1Q8N8Q1 229 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 OR6K6Q8NGW6 343 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 OR51A7Q8NH64 312 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 OR10G6Q8NH81 332 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 LILRB4Q8NHJ6 448 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 ZNF414Q96IQ9 312 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 GLT1D1Q96MS3 346 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 HSD17B10Q99714 261 aaKnown RBP1.86□□□□□ -2.11
CD44-234ENST00000531873 RHOXF2Q9BQY4 288 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 SLC17A9Q9BYT1 436 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 FGF23Q9GZV9 251 aaPredicted RBP1.86□□□□□ -2.11
CD44-234ENST00000531873 ARV1Q9H2C2 271 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 SLC38A10Q9HBR0 1119 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 ZNF302Q9NR11 478 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 TREX1Q9NSU2 369 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 VAX2Q9UIW0 290 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 ZNF223Q9UK11 482 aaPredicted RBP1.86□□□□□ -2.11
CD44-234ENST00000531873 PSG11Q9UQ72 335 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 V9GYY9 64 aa1.86□□□□□ -2.11
CD44-234ENST00000531873 TMEM94Q12767 1356 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 BAZ1AQ9NRL2 1556 aaPredicted RBP1.85□□□□□ -2.11
CD44-234ENST00000531873 IGLV4-69A0A075B6H9 119 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 TMEM223A0PJW6 202 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 C5orf63A6NC05 138 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 TVP23AA6NH52 213 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 RSPH10B2B2RC85 870 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 K7ERQ8 282 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms