RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 LOC390937A0A1W2PQ73 354 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 PLSCR5A0PG75 271 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 TBX1O43435 398 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 LILRA1O75019 489 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 NCR1O76036 304 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 ERCC1P07992 297 aaPredicted RBP12.3□□□□□ -0.44
CPSF1-206ENST00000531480 TACSTD2P09758 323 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 CCL1P22362 96 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 OR12D2P58182 307 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 ST3GAL4Q11206 333 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 TIGD6Q17RP2 521 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 Q5PR19 223 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 TMPRSS11AQ6ZMR5 421 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 LHFPL3Q86UP9 236 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 CATSPERDQ86XM0 798 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 YIPF7Q8N8F6 280 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 PELI1Q96FA3 418 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 ALG8Q9BVK2 526 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 MSL2Q9HCI7 577 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 BRD7Q9NPI1 651 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 ACOXLQ9NUZ1 547 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 MRPL15Q9P015 296 aaKnown RBP12.3□□□□□ -0.44
CPSF1-206ENST00000531480 OR52A1Q9UKL2 312 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 HIVEP1P15822 2718 aa12.3□□□□□ -0.44
CPSF1-206ENST00000531480 FLNAP21333 2647 aaKnown RBP12.29□□□□□ -0.44
CPSF1-206ENST00000531480 LOC110117498-PIK3R3F6TDL0 507 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 MLNRO43193 412 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 XPNPEP2O43895 674 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 NOL3O60936 208 aaKnown RBP12.29□□□□□ -0.44
CPSF1-206ENST00000531480 CDK1P06493 297 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 CSF3P09919 207 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 ATP6V1B1P15313 513 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 MAGEB1P43366 347 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 GSK3AP49840 483 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 ETV1P50549 477 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 CCR9P51686 369 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 DSCR9P59020 149 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 TP53I3Q53FA7 332 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 AHSA2Q719I0 299 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 ZNF485Q8NCK3 441 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 OR13G1Q8NGZ3 307 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 PPP1R14AQ96A00 147 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 MND1Q9BWT6 205 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 FAM192AQ9GZU8 254 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 SLC22A4Q9H015 551 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 TPK1Q9H3S4 243 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 GNG8Q9UK08 70 aa12.29□□□□□ -0.44
CPSF1-206ENST00000531480 CAB39Q9Y376 341 aaPredicted RBP12.29□□□□□ -0.44
CPSF1-206ENST00000531480 A0A1B0GTI1 187 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 SMIM31A0A1B0GVY4 71 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 DHRS7CA6NNS2 312 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 MYL12BO14950 172 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 LY6HO94772 140 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 PTBP3O95758 552 aaKnown RBP12.28□□□□□ -0.44
CPSF1-206ENST00000531480 HPXP02790 462 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 ACKR3P25106 362 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 PRSS12P56730 875 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
CPSF1-206ENST00000531480 WDR38Q5JTN6 314 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 FAM220AQ7Z4H9 259 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 GPR141Q7Z602 305 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 KLBQ86Z14 1044 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 OR5AS1Q8N127 324 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 PRSS35Q8N3Z0 413 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 CELF2-AS1Q8N7Q2 184 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 CSNK2A3Q8NEV1 391 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 WFDC11Q8NEX6 87 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 OR56B2PQ8NGI1 322 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 OR2G2Q8NGZ5 317 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 RPS4Y2Q8TD47 263 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 C4orf36Q96KX1 117 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 SOX7Q9BT81 388 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 CDCA4Q9BXL8 241 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 ISG20L2Q9H9L3 353 aaKnown RBP12.28□□□□□ -0.44
CPSF1-206ENST00000531480 TMEM100Q9NV29 134 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 IL19Q9UHD0 177 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 N6AMT1Q9Y5N5 214 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 C2CD3Q4AC94 2353 aa12.28□□□□□ -0.44
CPSF1-206ENST00000531480 GGT3PA6NGU5 568 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 VWC2LB2RUY7 222 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 NDUFS8O00217 210 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 SSX4O60224 188 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 GMDSO60547 372 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 RP2O75695 350 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 RPP14O95059 124 aaKnown RBP12.27□□□□□ -0.45
CPSF1-206ENST00000531480 CST4P01036 141 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 ISG15P05161 165 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 DAOP14920 347 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 GIFP27352 417 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 CRYBB2P43320 205 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 KIR3DL2P43630 455 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 TGM4P49221 684 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 NANOS3P60323 173 aaKnown RBP12.27□□□□□ -0.45
CPSF1-206ENST00000531480 CCL8P80075 99 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 RIN1Q13671 783 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 CLEC12BQ2HXU8 276 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 BCL2L15Q5TBC7 163 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 ZBTB37Q5TC79 503 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 KCTD8Q6ZWB6 473 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 TGIF2LYQ8IUE0 185 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms