RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TBX1O43435 398 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 TOX4O94842 621 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 GYPAP02724 150 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 MMP9P14780 707 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 ZNF3P17036 446 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 CX3CR1P49238 355 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 FAM3AP98173 230 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 MS4A2Q01362 244 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 EIF2B1Q14232 305 aaKnown RBP13.08□□□□□ -0.32
CPSF1-205ENST00000531042 TRIM25Q14258 630 aaKnown RBP13.08□□□□□ -0.32
CPSF1-205ENST00000531042 FAM98BQ52LJ0 330 aaKnown RBP13.08□□□□□ -0.32
CPSF1-205ENST00000531042 TEX36Q5VZQ5 186 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 RUSC1-AS1Q66K80 236 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 Q6YL49 198 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 SLC16A9Q7RTY1 509 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 C11orf53Q8IXP5 236 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 PNLDC1Q8NA58 520 aaKnown RBP13.08□□□□□ -0.32
CPSF1-205ENST00000531042 TMIGD2Q96BF3 282 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 SGK3Q96BR1 496 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 NSL1Q96IY1 281 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 WDFY2Q96P53 400 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 TBX15Q96SF7 602 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 NIPSNAP1Q9BPW8 284 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 TOR3AQ9H497 397 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 NOX4Q9NPH5 578 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 CMC2Q9NRP2 79 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 KIF17Q9P2E2 1029 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 CENPVL3A0A0U1RRI6 287 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 hCG_1807616A0A1W2PRN6 198 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 FCN3O75636 299 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 APOC1P02654 83 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 ANXA2P07355 339 aaKnown RBP13.07□□□□□ -0.32
CPSF1-205ENST00000531042 MDKP21741 143 aaPredicted RBP13.07□□□□□ -0.32
CPSF1-205ENST00000531042 HSD11B1P28845 292 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 POU4F2Q12837 409 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 TIGD6Q17RP2 521 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 CD300LDQ6UXZ3 194 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 PRSS45Q7RTY3 260 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 DPY19L4Q7Z388 723 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 WDR86Q86TI4 376 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 OR10G2Q8NGC3 310 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 OR6N2Q8NGY6 317 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 OR8S1Q8NH09 359 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 RNF133Q8WVZ7 376 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 REEP6Q96HR9 211 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 INTS14Q96SY0 518 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 ABHD6Q9BV23 337 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 SIRPDQ9H106 197 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 SLITRK2Q9H156 845 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 SP140LQ9H930 580 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 MED20Q9H944 212 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 MARCH7Q9H992 704 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 KAAG1Q9UBP8 84 aa13.07□□□□□ -0.32
CPSF1-205ENST00000531042 IGHV3OR15-7A0A075B7D8 119 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 hCG_38984A0A1B0GV85 526 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 FAM181BA6NEQ2 426 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 FAM183AA6NL82 134 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 DVL1O14640 695 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 OMGP23515 440 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 GSTT1P30711 240 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 GRK5P34947 590 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 C11orf91Q3C1V1 193 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 METTL11BQ5VVY1 283 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 FAM57BQ71RH2 274 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 RHOUQ7L0Q8 258 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 ERI1Q8IV48 349 aaKnown RBP13.06□□□□□ -0.32
CPSF1-205ENST00000531042 IQCF1Q8N6M8 205 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 OR1M1Q8NGA1 313 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 TEX47Q8TBZ9 253 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 AMELYQ99218 206 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 RNPEPL1Q9HAU8 725 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 TNFRSF19Q9NS68 423 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 ZNF319Q9P2F9 582 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 MMP24Q9Y5R2 645 aa13.06□□□□□ -0.32
CPSF1-205ENST00000531042 GLCEO94923 617 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 ECDO95905 644 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-205ENST00000531042 MELTFP08582 738 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 RAP2AP10114 183 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 CFL1P23528 166 aaKnown RBP13.05□□□□□ -0.32
CPSF1-205ENST00000531042 OPRL1P41146 370 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 ZNF121P58317 390 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-205ENST00000531042 GK3PQ14409 553 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 PDCD1Q15116 288 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 KLHL12Q53G59 568 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 BTN2A1Q7KYR7 527 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 SHFQ7M4L6 423 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 TMEM86BQ8N661 226 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 OR52H1Q8NGJ2 320 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 GIPC3Q8TF64 312 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 LRRC29Q8WV35 223 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 GATAD2BQ8WXI9 593 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 OTULINQ96BN8 352 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 FAM71F1Q96KD3 344 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-205ENST00000531042 FEVQ99581 238 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 PPP1R3EQ9H7J1 279 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 ACOXLQ9NUZ1 547 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 DNAJC27Q9NZQ0 273 aa13.05□□□□□ -0.32
CPSF1-205ENST00000531042 IGHV1-69DA0A0B4J2H0 117 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 H3BN98 237 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 TIPRLO75663 272 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms