RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CSNK2A3Q8NEV1 391 aa13.01□□□□□ -0.33
CCS-206ENST00000530961 OR56B2PQ8NGI1 322 aa13.01□□□□□ -0.33
CCS-206ENST00000530961 UBASH3BQ8TF42 649 aa13.01□□□□□ -0.33
CCS-206ENST00000530961 GTF3AQ92664 365 aaKnown RBP13.01□□□□□ -0.33
CCS-206ENST00000530961 C4orf36Q96KX1 117 aa13.01□□□□□ -0.33
CCS-206ENST00000530961 ACOXLQ9NUZ1 547 aa13.01□□□□□ -0.33
CCS-206ENST00000530961 SCN3BQ9NY72 215 aa13.01□□□□□ -0.33
CCS-206ENST00000530961 EXOSC1Q9Y3B2 195 aaKnown RBP13.01□□□□□ -0.33
CCS-206ENST00000530961 LOC390937A0A1W2PQ73 354 aa13□□□□□ -0.33
CCS-206ENST00000530961 ANKRD30BLA7E2S9 258 aa13□□□□□ -0.33
CCS-206ENST00000530961 J3QLW9 94 aa13□□□□□ -0.33
CCS-206ENST00000530961 NDUFS8O00217 210 aa13□□□□□ -0.33
CCS-206ENST00000530961 TPD52L2O43399 206 aaKnown RBP13□□□□□ -0.33
CCS-206ENST00000530961 XPNPEP2O43895 674 aa13□□□□□ -0.33
CCS-206ENST00000530961 MTRF1O75570 445 aaKnown RBP13□□□□□ -0.33
CCS-206ENST00000530961 IGLV3-1P01715 115 aa13□□□□□ -0.33
CCS-206ENST00000530961 TTRP02766 147 aa13□□□□□ -0.33
CCS-206ENST00000530961 HPXP02790 462 aa13□□□□□ -0.33
CCS-206ENST00000530961 ZNF19P17023 458 aa13□□□□□ -0.33
CCS-206ENST00000530961 PDLIM4P50479 330 aa13□□□□□ -0.33
CCS-206ENST00000530961 CCL8P80075 99 aa13□□□□□ -0.33
CCS-206ENST00000530961 TNFAIP6P98066 277 aaPredicted RBP13□□□□□ -0.33
CCS-206ENST00000530961 ST3GAL4Q11206 333 aa13□□□□□ -0.33
CCS-206ENST00000530961 TSTQ16762 297 aaKnown RBP13□□□□□ -0.33
CCS-206ENST00000530961 FDX2Q6P4F2 183 aa13□□□□□ -0.33
CCS-206ENST00000530961 CLEC2AQ6UVW9 174 aa13□□□□□ -0.33
CCS-206ENST00000530961 TMPRSS11AQ6ZMR5 421 aa13□□□□□ -0.33
CCS-206ENST00000530961 CATSPERDQ86XM0 798 aa13□□□□□ -0.33
CCS-206ENST00000530961 PRIMA1Q86XR5 153 aa13□□□□□ -0.33
CCS-206ENST00000530961 ZNF786Q8N393 782 aa13□□□□□ -0.33
CCS-206ENST00000530961 ZNF540Q8NDQ6 660 aa13□□□□□ -0.33
CCS-206ENST00000530961 WFDC11Q8NEX6 87 aa13□□□□□ -0.33
CCS-206ENST00000530961 OR2Z1Q8NG97 314 aa13□□□□□ -0.33
CCS-206ENST00000530961 RDH5Q92781 318 aa13□□□□□ -0.33
CCS-206ENST00000530961 ELMOD3Q96FG2 381 aa13□□□□□ -0.33
CCS-206ENST00000530961 RHNO1Q9BSD3 238 aa13□□□□□ -0.33
CCS-206ENST00000530961 SAP30LQ9HAJ7 183 aa13□□□□□ -0.33
CCS-206ENST00000530961 DLL4Q9NR61 685 aa13□□□□□ -0.33
CCS-206ENST00000530961 IL19Q9UHD0 177 aa13□□□□□ -0.33
CCS-206ENST00000530961 GTF2A1LQ9UNN4 478 aa13□□□□□ -0.33
CCS-206ENST00000530961 CAB39Q9Y376 341 aaPredicted RBP13□□□□□ -0.33
CCS-206ENST00000530961 GMDSO60547 372 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 LILRA1O75019 489 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 CCDC159P0C7I6 412 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 LIMS3P0CW19 117 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 LIMS4P0CW20 117 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 TNFRSF1AP19438 455 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 MAP2K3P46734 347 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 CCR9P51686 369 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 PRSS12P56730 875 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 COMMD2Q86X83 199 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 STX19Q8N4C7 294 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 ZNF525Q8N782 197 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 SPERTQ8NA61 448 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 CCDC54Q8NEL0 328 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 OR2G2Q8NGZ5 317 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 OR51E1Q8TCB6 317 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 FAM168AQ92567 244 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 PPP1R14AQ96A00 147 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 PELI1Q96FA3 418 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 LYZL4Q96KX0 146 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 Q96MF0 132 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 GPR84Q9NQS5 396 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 FKBP14Q9NWM8 211 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 TPRKBQ9Y3C4 175 aa12.99□□□□□ -0.33
CCS-206ENST00000530961 RAI1Q7Z5J4 1906 aaPredicted RBP12.98□□□□□ -0.33
CCS-206ENST00000530961 DENRO43583 198 aaKnown RBP12.98□□□□□ -0.33
CCS-206ENST00000530961 NCR1O76036 304 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 LY6HO94772 140 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 RPSAP08865 295 aaKnown RBP12.98□□□□□ -0.33
CCS-206ENST00000530961 HTR1AP08908 422 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 ACHEP22303 614 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 CA6P23280 308 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 PSMB10P40306 273 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 CRYBB2P43320 205 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 SRP9P49458 86 aaKnown RBP12.98□□□□□ -0.33
CCS-206ENST00000530961 ETV1P50549 477 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 GBX2P52951 348 aaPredicted RBP12.98□□□□□ -0.33
CCS-206ENST00000530961 TMEM33P57088 247 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 MZT1Q08AG7 82 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 RIPPLY1Q0D2K3 151 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 ZBTB37Q5TC79 503 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 KRT74Q7RTS7 529 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 BIVMQ86UB2 503 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 KLHL36Q8N4N3 616 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 CELF2-AS1Q8N7Q2 184 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 PLPP7Q8NBV4 271 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 SEMA6DQ8NFY4 1073 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 MYDGFQ969H8 173 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 RNF166Q96A37 237 aaPredicted RBP12.98□□□□□ -0.33
CCS-206ENST00000530961 CNBD2Q96M20 576 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 ISG20L2Q9H9L3 353 aaKnown RBP12.98□□□□□ -0.33
CCS-206ENST00000530961 ABCB9Q9NP78 766 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 SLC22A13Q9Y226 551 aa12.98□□□□□ -0.33
CCS-206ENST00000530961 IGHV1-69-2A0A0G2JMI3 117 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.97□□□□□ -0.33
CCS-206ENST00000530961 DHRS7CA6NNS2 312 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 SLC1A7O00341 560 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 MLNRO43193 412 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 DHRS3O75911 302 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms