RNA–Protein interactions for RNA: ENST00000529182.5

VPS28-210, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2 BASIC

Gene VPS28, Length 1,010 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-210ENST00000529182 MOGAT3Q86VF5 341 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 DHRSXQ8N5I4 330 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 ZNF420Q8TAQ5 688 aaPredicted RBP11.29□□□□□ -0.6
VPS28-210ENST00000529182 CNIH3Q8TBE1 160 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 OR51E1Q8TCB6 317 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 SIGLEC11Q96RL6 698 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 ADI1Q9BV57 179 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 RNPEPL1Q9HAU8 725 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 GCM1Q9NP62 436 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 G6PC2Q9NQR9 355 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 TMEM106BQ9NUM4 274 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 MRPL15Q9P015 296 aaKnown RBP11.29□□□□□ -0.6
VPS28-210ENST00000529182 EXOGQ9Y2C4 368 aaKnown RBP11.29□□□□□ -0.6
VPS28-210ENST00000529182 RHBDD3Q9Y3P4 386 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 WIPI2Q9Y4P8 454 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 R4GMQ9 66 aa11.29□□□□□ -0.6
VPS28-210ENST00000529182 HIVEP2P31629 2446 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 ABCA2Q9BZC7 2435 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 METTL15A6NJ78 407 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 SNTNA6NMZ2 147 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 H0YHG0 523 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 GNAO1P09471 354 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 ZNF16P17020 682 aaPredicted RBP11.28□□□□□ -0.6
VPS28-210ENST00000529182 CFL1P23528 166 aaKnown RBP11.28□□□□□ -0.6
VPS28-210ENST00000529182 PSMB10P40306 273 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 PMELP40967 661 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 SRP9P49458 86 aaKnown RBP11.28□□□□□ -0.6
VPS28-210ENST00000529182 MMP16P51512 607 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 OR8B8Q15620 311 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 LIPNQ5VXI9 398 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 COMMD2Q86X83 199 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 CLDND2Q8NHS1 167 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 FAM71F1Q96KD3 344 aaPredicted RBP11.28□□□□□ -0.6
VPS28-210ENST00000529182 Q96MT0 163 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 RGCCQ9H4X1 137 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 GPR84Q9NQS5 396 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 UFSP2Q9NUQ7 469 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 ACOXLQ9NUZ1 547 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 NUFIP1Q9UHK0 495 aaKnown RBP11.28□□□□□ -0.6
VPS28-210ENST00000529182 GNG8Q9UK08 70 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 OR52A1Q9UKL2 312 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 PPP1R3CQ9UQK1 317 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 SLC22A13Q9Y226 551 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 MYRFQ9Y2G1 1151 aa11.28□□□□□ -0.6
VPS28-210ENST00000529182 FN1P02751 2386 aaKnown RBP11.27□□□□□ -0.6
VPS28-210ENST00000529182 TANC2Q9HCD6 1990 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 A0A0U1RQV5 110 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 LOC100289279A0A1B0GTE1 492 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 DAPL1A0PJW8 107 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 ACOD1A6NK06 481 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 ANKRD30BLA7E2S9 258 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 CD5LO43866 347 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 CYB5R3P00387 301 aaPredicted RBP11.27□□□□□ -0.61
VPS28-210ENST00000529182 TTRP02766 147 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 DDOSTP39656 456 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 CAPGP40121 348 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 CD200P41217 278 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 OR12D2P58182 307 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 ISL1P61371 349 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 ACTC1P68032 377 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 ACTA1P68133 377 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 HOXA4Q00056 320 aaPredicted RBP11.27□□□□□ -0.61
VPS28-210ENST00000529182 MPPED2Q15777 294 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 ODF4Q2M2E3 257 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 BCL2L15Q5TBC7 163 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 RORBQ92753 470 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 MSI2Q96DH6 328 aaKnown RBP11.27□□□□□ -0.61
VPS28-210ENST00000529182 PAPOLGQ9BWT3 736 aaKnown RBP11.27□□□□□ -0.61
VPS28-210ENST00000529182 SLC22A4Q9H015 551 aa11.27□□□□□ -0.61
VPS28-210ENST00000529182 DYSFO75923 2080 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 ISPDA4D126 451 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 ZNF850A8MQ14 1090 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 TMEM178BH3BS89 294 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 H3BSH0 61 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 P2RY10O00398 339 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 GMDSO60547 372 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 FAM20BO75063 409 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 SULT1C4O75897 302 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 ZNF205O95201 554 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 IGLV3-1P01715 115 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 AQP4P55087 323 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 SLC3A1Q07837 685 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 CDONQ4KMG0 1287 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 DMRTC1Q5HYR2 192 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 FAM201AQ5SY85 155 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 CYB5R2Q6BCY4 276 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 WDR86Q86TI4 376 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 LHFPL3Q86UP9 236 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 CATSPERDQ86XM0 798 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 ELMOD2Q8IZ81 293 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 PRSS35Q8N3Z0 413 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 ACBD7Q8N6N7 88 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 OR52I1Q8NGK6 324 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 PIGCQ92535 297 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 RAB1CQ92928 201 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 RNF166Q96A37 237 aaPredicted RBP11.26□□□□□ -0.61
VPS28-210ENST00000529182 TIMD4Q96H15 378 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 FGF23Q9GZV9 251 aaPredicted RBP11.26□□□□□ -0.61
VPS28-210ENST00000529182 VCXQ9H320 206 aa11.26□□□□□ -0.61
VPS28-210ENST00000529182 MOB1AQ9H8S9 216 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms