RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 A0A0X1KG70 313 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 A0A1B0GW55 424 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 GGT3PA6NGU5 568 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 C22orf46C9J442 243 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 G3V2T6 193 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 RGS9O75916 674 aaPredicted RBP8.88□□□□□ -0.99
CD44-227ENST00000528086 ANXA2P07355 339 aaKnown RBP8.88□□□□□ -0.99
CD44-227ENST00000528086 DUX4L2P0CJ85 424 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 DUX4L3P0CJ86 424 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 DUX4L4P0CJ87 422 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 DUX4L5P0CJ88 424 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 DUX4L6P0CJ89 424 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 DUX4L7P0CJ90 424 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 HNF1AP20823 631 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 FASP25445 335 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 SRP14P37108 136 aaKnown RBP8.88□□□□□ -0.99
CD44-227ENST00000528086 ESRRGP62508 458 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 CSNK2BP67870 215 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 MFGE8Q08431 387 aaPredicted RBP8.88□□□□□ -0.99
CD44-227ENST00000528086 ZNF154Q13106 437 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 KPNB1Q14974 876 aaKnown RBP8.88□□□□□ -0.99
CD44-227ENST00000528086 TAF13Q15543 124 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 OR8G1Q15617 311 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 DCAF12L2Q5VW00 463 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 DUX4L9Q6RFH8 374 aaPredicted RBP8.88□□□□□ -0.99
CD44-227ENST00000528086 SSX6Q7RTT6 188 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 KLBQ86Z14 1044 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 BCL6BQ8N143 479 aaPredicted RBP8.88□□□□□ -0.99
CD44-227ENST00000528086 SPICQ8N5J4 248 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 TCEANCQ8N8B7 351 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 ZNF454Q8N9F8 522 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 OR4M2Q8NGB6 313 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 HPSE2Q8WWQ2 592 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 PYDC1Q8WXC3 89 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 DNAJC9Q8WXX5 260 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 ITPKCQ96DU7 683 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 OSBPL10Q9BXB5 764 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 TTTY10Q9BZA0 68 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 C7orf69Q9H7B7 122 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 ADGRL4Q9HBW9 690 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 SMURF1Q9HCE7 757 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 FAM206AQ9NX38 181 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 DUX4Q9UBX2 424 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 OAZ3Q9UMX2 235 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 FBN3Q75N90 2809 aa8.88□□□□□ -0.99
CD44-227ENST00000528086 SAC3D1A6NKF1 404 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 J3QLI3 93 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 IFNL4K9M1U5 179 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 TBX1O43435 398 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 XRCC2O43543 280 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 GMDSO60547 372 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 FOXH1O75593 365 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 H2BFMP0C1H6 154 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 ANPEPP15144 967 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 EPHA1P21709 976 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 PAICSP22234 425 aaKnown RBP8.87□□□□□ -0.99
CD44-227ENST00000528086 DCTDP32321 178 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 SLC15A1P46059 708 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 PSMA6P60900 246 aaKnown RBP8.87□□□□□ -0.99
CD44-227ENST00000528086 ACTR3P61158 418 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 ROM1Q03395 351 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 POU4F2Q12837 409 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 DMRTC1Q5HYR2 192 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 ZNF684Q5T5D7 378 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 SFRP4Q6FHJ7 346 aaPredicted RBP8.87□□□□□ -0.99
CD44-227ENST00000528086 PEG10Q86TG7 708 aaKnown RBP8.87□□□□□ -0.99
CD44-227ENST00000528086 FAM90A1Q86YD7 464 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.87□□□□□ -0.99
CD44-227ENST00000528086 TMEM163Q8TC26 289 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 TMEM158Q8WZ71 300 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 CENPNQ96H22 339 aaPredicted RBP8.87□□□□□ -0.99
CD44-227ENST00000528086 C1orf147Q96MC9 270 aaPredicted RBP8.87□□□□□ -0.99
CD44-227ENST00000528086 ZNF48Q96MX3 618 aaPredicted RBP8.87□□□□□ -0.99
CD44-227ENST00000528086 OR8B4Q96RC9 309 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 IL4I1Q96RQ9 567 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 GABARAPL3Q9BY60 117 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 YIPF3Q9GZM5 350 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 TLNRD1Q9H1K6 362 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 KRT84Q9NSB2 600 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 RNF7Q9UBF6 113 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 METRNQ9UJH8 293 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 PPIAL4AQ9Y536 164 aa8.87□□□□□ -0.99
CD44-227ENST00000528086 IGHV3OR15-7A0A075B7D8 119 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 A0A1B0GTI1 187 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 LGALS8O00214 317 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 TFF1P04155 84 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 GRPP07492 148 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 IGHV4-38-2P0DP08 117 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 HSD11B1P28845 292 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 DDOSTP39656 456 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 RASSF2P50749 326 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 RPS7P62081 194 aaKnown RBP8.86□□□□□ -0.99
CD44-227ENST00000528086 TIGD6Q17RP2 521 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 FAM76BQ5HYJ3 339 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 WDR25Q64LD2 544 aaPredicted RBP8.86□□□□□ -0.99
CD44-227ENST00000528086 WDR82Q6UXN9 313 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 PLEKHG7Q6ZR37 379 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 MEPCEQ7L2J0 689 aaKnown RBP8.86□□□□□ -0.99
CD44-227ENST00000528086 ZDHHC13Q8IUH4 622 aa8.86□□□□□ -0.99
CD44-227ENST00000528086 MUC20Q8N307 709 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms