RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 MTURNQ8N3F0 131 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 ZNF615Q8N8J6 731 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 OR4B1Q8NGF8 309 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 OR6K2Q8NGY2 324 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 OR14C36Q8NHC7 312 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 SUN3Q8TAQ9 357 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 SLC2A12Q8TD20 617 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 TMEM170AQ8WVE7 144 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 AUTS2Q8WXX7 1259 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 ZCCHC14Q8WYQ9 949 aaKnown RBP5.19□□□□□ -1.58
CD44-225ENST00000527326 DPF1Q92782 380 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 BCL2L2Q92843 193 aaPredicted RBP5.19□□□□□ -1.58
CD44-225ENST00000527326 TSLPQ969D9 159 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 SEH1LQ96EE3 360 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 KTI12Q96EK9 354 aaPredicted RBP5.19□□□□□ -1.58
CD44-225ENST00000527326 REEP6Q96HR9 211 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 SEC22AQ96IW7 307 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 APOLD1Q96LR9 279 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 GNRHR2Q96P88 292 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 TBX15Q96SF7 602 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 NIPSNAP3BQ9BS92 247 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 RNF126Q9BV68 326 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 FNDC11Q9BVV2 318 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 OR11A1Q9GZK7 315 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 CHST6Q9GZX3 395 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 A4GALTQ9NPC4 353 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 OR2S2Q9NQN1 319 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 SLC17A5Q9NRA2 495 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 PIGVQ9NUD9 493 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 BET1LQ9NYM9 111 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 PLEK2Q9NYT0 353 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 MRPL27Q9P0M9 148 aaKnown RBP5.19□□□□□ -1.58
CD44-225ENST00000527326 UQCR10Q9UDW1 63 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 IL36AQ9UHA7 158 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 CDC42EP3Q9UKI2 254 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 SLC45A2Q9UMX9 530 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 AK6Q9Y3D8 172 aaKnown RBP5.19□□□□□ -1.58
CD44-225ENST00000527326 YIPF1Q9Y548 306 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 MRPS18BQ9Y676 258 aaKnown RBP5.19□□□□□ -1.58
CD44-225ENST00000527326 V9GY05 133 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 THSD7BQ9C0I4 1608 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 TDRD15B5MCY1 1934 aaKnown RBP5.19□□□□□ -1.58
CD44-225ENST00000527326 KCNE1BA0A087WTH5 132 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 BORCS7-ASMTA0A0B4J1R7 106 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ZNF860A6NHJ4 632 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 HSPB2A8KAH6 182 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ZNF727A8MUV8 499 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 LOC730098B7Z3J9 87 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ETV2O00321 342 aaPredicted RBP5.18□□□□□ -1.58
CD44-225ENST00000527326 SCDO00767 359 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 HSD17B6O14756 317 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 TAPBPO15533 448 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 FCMRO60667 390 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 TBX6O95947 436 aaPredicted RBP5.18□□□□□ -1.58
CD44-225ENST00000527326 EDN1P05305 212 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ST6GAL1P15907 406 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 PTNP21246 168 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 RPS4Y1P22090 263 aaKnown RBP5.18□□□□□ -1.58
CD44-225ENST00000527326 IMPA1P29218 277 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 PRSS3P35030 304 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 BLKP51451 505 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ZNF41P51814 821 aaPredicted RBP5.18□□□□□ -1.58
CD44-225ENST00000527326 EMP2P54851 167 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 UBE2NP61088 152 aaKnown RBP5.18□□□□□ -1.58
CD44-225ENST00000527326 COL10A1Q03692 680 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 C17orf67Q0P5P2 114 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 IL24Q13007 206 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 SLAQ13239 276 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 CAPSQ13938 189 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 SLC17A1Q14916 467 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 SHBQ15464 509 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 HSPB2Q16082 182 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 MLANAQ16655 118 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 DECR1Q16698 335 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 SLC22A6Q4U2R8 563 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 TMEM225Q6GV28 225 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 CLEC18BQ6UXF7 455 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 MEPCEQ7L2J0 689 aaKnown RBP5.18□□□□□ -1.58
CD44-225ENST00000527326 LRRC70Q7Z2Q7 622 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ACOT1Q86TX2 421 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ZNF429Q86V71 674 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ARHGAP12Q8IWW6 846 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 NRMQ8IXM6 262 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 CMTM1Q8IZ96 169 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 SYS1Q8N2H4 156 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 RNF175Q8N4F7 328 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 SIRT6Q8N6T7 355 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 CLEC1AQ8NC01 280 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 OR10W1Q8NGF6 305 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 OR51A2Q8NGJ7 313 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 OR10G4Q8NGN3 311 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 OR11L1Q8NGX0 322 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 GPR119Q8TDV5 335 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 CXorf40AQ8TE69 158 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 PSMG2Q969U7 264 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ERGIC1Q969X5 290 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 PPP1R14AQ96A00 147 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ADIPOR1Q96A54 375 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 PINX1Q96BK5 328 aaKnown RBP5.18□□□□□ -1.58
CD44-225ENST00000527326 GPR146Q96CH1 333 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms