RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 OR56B2PQ8NGI1 322 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 LYZL4Q96KX0 146 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 CDCA4Q9BXL8 241 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 ISG20L2Q9H9L3 353 aaKnown RBP17.67■□□□□ 0.42
CD44-222ENST00000526025 TMEM100Q9NV29 134 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 PCDHGB5Q9Y5G0 923 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 CREBBPQ92793 2442 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 AKAP9Q99996 3911 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 MTRF1O75570 445 aaKnown RBP17.66■□□□□ 0.42
CD44-222ENST00000526025 ISG15P05161 165 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 CSF3P09919 207 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 TNFSF4P23510 183 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 C21orf33P30042 268 aaPredicted RBP17.66■□□□□ 0.42
CD44-222ENST00000526025 GBX2P52951 348 aaPredicted RBP17.66■□□□□ 0.42
CD44-222ENST00000526025 MVKQ03426 396 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 GFOD2Q3B7J2 385 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 WDR38Q5JTN6 314 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 OR5AS1Q8N127 324 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 ZCCHC24Q8N2G6 241 aaKnown RBP17.66■□□□□ 0.42
CD44-222ENST00000526025 OR51E1Q8TCB6 317 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 GTF3AQ92664 365 aaKnown RBP17.66■□□□□ 0.42
CD44-222ENST00000526025 YTHDF1Q9BYJ9 559 aaKnown RBP17.66■□□□□ 0.42
CD44-222ENST00000526025 EGLN1Q9GZT9 426 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 TPK1Q9H3S4 243 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 MSL2Q9HCI7 577 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 ABCB9Q9NP78 766 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 GPR84Q9NQS5 396 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 UBAP1Q9NZ09 502 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 GTF2A1LQ9UNN4 478 aa17.66■□□□□ 0.42
CD44-222ENST00000526025 GMDSO60547 372 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 NDUFS7O75251 213 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 DHRS3O75911 302 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 PSMB10P40306 273 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 MAP2K3P46734 347 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 DSCR9P59020 149 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 TNK1Q13470 666 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 ALKBH1Q13686 389 aaKnown RBP17.65■□□□□ 0.42
CD44-222ENST00000526025 TESK1Q15569 626 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 DNM1P46Q6ZS02 220 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 DOK3Q7L591 496 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 ZNF786Q8N393 782 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 CELF2-AS1Q8N7Q2 184 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 ZNF485Q8NCK3 441 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 BHLHE23Q8NDY6 225 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 PAK1IP1Q9NWT1 392 aaPredicted RBP17.65■□□□□ 0.42
CD44-222ENST00000526025 FRRS1LQ9P0K9 344 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 CLEC2DQ9UHP7 191 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 SLC22A13Q9Y226 551 aa17.65■□□□□ 0.42
CD44-222ENST00000526025 A0A1B0GTI1 187 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 ANKRD30BLA7E2S9 258 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 PTGES3LE9PB15 166 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 SPRY3O43610 288 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 LILRA1O75019 489 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 CST4P01036 141 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 ZNF12P17014 697 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 KIR3DL2P43630 455 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 PRSS12P56730 875 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 NANOS3P60323 173 aaKnown RBP17.64■□□□□ 0.41
CD44-222ENST00000526025 GABARAPL2P60520 117 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 Q5PR19 223 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 TMEM244Q5VVB8 128 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 RPL22L1Q6P5R6 122 aaKnown RBP17.64■□□□□ 0.41
CD44-222ENST00000526025 COMMD2Q86X83 199 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 KRTAP1-3Q8IUG1 177 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 SPERTQ8NA61 448 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 RPS4Y2Q8TD47 263 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 PPP1R14AQ96A00 147 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 ELMOD3Q96FG2 381 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 TRIM36Q9NQ86 728 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 BABAM2Q9NXR7 383 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 IL19Q9UHD0 177 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 ERGIC3Q9Y282 383 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 V9GYS6 101 aa17.64■□□□□ 0.41
CD44-222ENST00000526025 TMEM212A6NML5 194 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 OR4C45A6NMZ5 311 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 MYL12BO14950 172 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 MLNRO43193 412 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 RGS10O43665 173 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 MRPS14O60783 128 aaKnown RBP17.63■□□□□ 0.41
CD44-222ENST00000526025 ACKR3P25106 362 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 MAGEB1P43366 347 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 WNT4P56705 351 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 TAS2R43P59537 309 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 RIPPLY1Q0D2K3 151 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 IRF3Q14653 427 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 OR2G6Q5TZ20 316 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 PRSS48Q7RTY5 328 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 NANOGP1Q8N7R0 232 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 SEMA6DQ8NFY4 1073 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 OR2Z1Q8NG97 314 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 UBASH3BQ8TF42 649 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 C10orf35Q96D05 121 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 MND1Q9BWT6 205 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 SAP30LQ9HAJ7 183 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 DECR2Q9NUI1 292 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 LRRC42Q9Y546 428 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 MPC1Q9Y5U8 109 aa17.63■□□□□ 0.41
CD44-222ENST00000526025 OTOGQ6ZRI0 2925 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 ZNF816-ZNF321PA0A0X1KG74 233 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 A0A1B0GVI7 797 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms