RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 MICBQ29980 383 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 ENTPD8Q5MY95 495 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 STUMQ69YW2 141 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 TTC33Q6PID6 262 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 OR2W3Q7Z3T1 314 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 HDDC2Q7Z4H3 204 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 LRRC75AQ8NAA5 344 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 GPR32P1Q8NGA4 272 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 OR4X2Q8NGF9 303 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 OR52H1Q8NGJ2 320 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 OR5D13Q8NGL4 314 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 PFN4Q8NHR9 129 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 ZIM3Q96PE6 472 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 RBP7Q96R05 134 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 WACQ9BTA9 647 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 C20orf27Q9GZN8 174 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 TSPYL1Q9H0U9 437 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 RAD21L1Q9H4I0 556 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 ELL3Q9HB65 397 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 THUMPD1Q9NXG2 353 aaKnown RBP7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 SLC7A7Q9UM01 511 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 VPS13DQ5THJ4 4388 aa7.01□□□□□ -1.29
TRAPPC9-212ENST00000521944 GMNCA6NCL1 334 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 SH2D7A6NKC9 451 aaPredicted RBP7□□□□□ -1.29
TRAPPC9-212ENST00000521944 CPSF4LA6NMK7 179 aaKnown RBP7□□□□□ -1.29
TRAPPC9-212ENST00000521944 CD300LBA8K4G0 201 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 FAM90A22PA8MWA6 464 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 H7C1C5 153 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 OR7A10O76100 309 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 SHBGP04278 402 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 ALDOBP05062 364 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 LPLP06858 475 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 CTLA4P16410 223 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 MYF6P23409 242 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 RPL27P61353 136 aaKnown RBP7□□□□□ -1.29
TRAPPC9-212ENST00000521944 LCN6P62502 163 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 RPL11P62913 178 aaKnown RBP7□□□□□ -1.29
TRAPPC9-212ENST00000521944 HIST1H3AP68431 136 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 DUSP7Q16829 419 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 LRRC10Q5BKY1 277 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 HIST2H3PS2Q5TEC6 136 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 KCTD18Q6PI47 426 aaPredicted RBP7□□□□□ -1.29
TRAPPC9-212ENST00000521944 HIST2H3AQ71DI3 136 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 SLC36A1Q7Z2H8 476 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 CNPY4Q8N129 248 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 ZNF781Q8N8C0 355 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 RPS4Y2Q8TD47 263 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 LRRC29Q8WV35 223 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 LIPHQ8WWY8 451 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 SLCO4A1Q96BD0 722 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 RAX2Q96IS3 184 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 GAFA1Q96PS6 74 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 HCAR1Q9BXC0 346 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 TXLNGYQ9BZA5 131 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 ZMAT4Q9H898 229 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 AIG1Q9NVV5 245 aa7□□□□□ -1.29
TRAPPC9-212ENST00000521944 STX18Q9P2W9 335 aaKnown RBP7□□□□□ -1.29
TRAPPC9-212ENST00000521944 ZNF256Q9Y2P7 627 aaPredicted RBP7□□□□□ -1.29
TRAPPC9-212ENST00000521944 hCG_1807616A0A1W2PRN6 198 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 TMEM247A6NEH6 219 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 A6NLC8 198 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 H0YAE9 185 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 CLIC1O00299 241 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 IMPA2O14732 288 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 TBX1O43435 398 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 GMDSO60547 372 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 MT-ND1P03886 318 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 ACSM4P0C7M7 580 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 LBPP18428 481 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 COX7A1P24310 79 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 AQP1P29972 269 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 GUCA1AP43080 201 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 DYNLT3P51808 116 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 CSNK2BP67870 215 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 CDK6Q00534 326 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 LRRC74AQ0VAA2 488 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 AQP6Q13520 282 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 SSX2Q16385 188 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 REEP3Q6NUK4 255 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 C8orf74Q6P047 294 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 WDR82Q6UXN9 313 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 ZNF788Q6ZQV5 615 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 ZNF329Q86UD4 541 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 MSRB3Q8IXL7 192 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 SMYD1Q8NB12 490 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 OR51D1Q8NGF3 324 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 OR9Q1Q8NGQ5 310 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 SPRYD4Q8WW59 207 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 LINC00476Q8WZB0 136 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 ADAT1Q9BUB4 502 aaKnown RBP6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 PAIP1Q9H074 479 aaKnown RBP6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 WDR13Q9H1Z4 485 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 RNPEPL1Q9HAU8 725 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 C19orf12Q9NSK7 152 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 SNTG1Q9NSN8 517 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 VNN3Q9NY84 501 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 SLC25A37Q9NYZ2 338 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 SLC25A10Q9UBX3 287 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 ATPIF1Q9UII2 106 aa6.99□□□□□ -1.29
TRAPPC9-212ENST00000521944 ZNF391Q9UJN7 358 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms