RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 KIRREL2Q6UWL6 708 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 KIAA1549LQ6ZVL6 1849 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 RTN4RL2Q86UN3 420 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 LINC01555Q8NAE3 123 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 FAM213BQ8TBF2 198 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 OVCA2Q8WZ82 227 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 RTBDNQ9BSG5 229 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-208ENST00000519004 SRPK3Q9UPE1 567 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 POLR3KQ9Y2Y1 108 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-208ENST00000519004 SPTBP11277 2137 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 CHRM2P08172 466 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 ERGP11308 486 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 RPS2P15880 293 aaKnown RBP12.06□□□□□ -0.48
PABPC1-208ENST00000519004 HMGA1P17096 107 aaKnown RBP12.06□□□□□ -0.48
PABPC1-208ENST00000519004 IGFBP3P17936 291 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-208ENST00000519004 P2RY1P47900 373 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 RND3P61587 244 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 CSNK1G2P78368 415 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 KCNMB1Q16558 191 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 IQCJQ1A5X6 159 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 ETFRF1Q6IPR1 90 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 FBXO46Q6PJ61 603 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-208ENST00000519004 TAAR8Q969N4 342 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 AMELYQ99218 206 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 VAX2Q9UIW0 290 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 DKKL1Q9UK85 242 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 SLC22A13Q9Y226 551 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 LNP1A1A4G5 178 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 DCDC2BA2VCK2 349 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 ATXN7O15265 892 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-208ENST00000519004 ERI3O43414 337 aaKnown RBP12.06□□□□□ -0.48
PABPC1-208ENST00000519004 ABLIM3O94929 683 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 IL6RP08887 468 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-208ENST00000519004 CST2P09228 141 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 FGF5P12034 268 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 FOLR1P15328 257 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 COL10A1Q03692 680 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 TLE4Q04727 773 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 LRRC69Q6ZNQ3 347 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 SLC25A26Q70HW3 274 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 SLC35E3Q7Z769 313 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 CYB561D1Q8N8Q1 229 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 CHST4Q8NCG5 386 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 NOXO1Q8NFA2 376 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 OR4K15Q8NH41 348 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 PPP1R14AQ96A00 147 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 PTX4Q96A99 478 aa12.06□□□□□ -0.48
PABPC1-208ENST00000519004 A0A1W2PPV9 198 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 SLC35G6P0C7Q6 338 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 ALOX5APP20292 161 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 CLDN6P56747 220 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 POLR2LP62875 67 aaKnown RBP12.05□□□□□ -0.48
PABPC1-208ENST00000519004 IAH1Q2TAA2 248 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-208ENST00000519004 ALG10BQ5I7T1 473 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 CLLU1OSQ5K130 101 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 DCST2Q5T1A1 773 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 ULK3Q6PHR2 472 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 SPSB3Q6PJ21 355 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 TMEM182Q6ZP80 229 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-208ENST00000519004 DTWD2Q8NBA8 298 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 OR13C3Q8NGS6 347 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 MS4A6EQ96DS6 147 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 NIPSNAP3BQ9BS92 247 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 RCL1Q9Y2P8 373 aaKnown RBP12.05□□□□□ -0.48
PABPC1-208ENST00000519004 RHBDD3Q9Y3P4 386 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 ZNF780BQ9Y6R6 833 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 HEATR5AQ86XA9 2040 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 TRBV24-1A0A075B6N3 115 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 BORCS7-ASMTA0A0B4J1R7 106 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 TRDCB7Z8K6 153 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 TMEM11P17152 192 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 CD82P27701 267 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 PPM1AP35813 382 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 CDKN1BP46527 198 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 MMP16P51512 607 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 LBX1P52954 281 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 ABHD17CQ6PCB6 329 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 LINC00114Q6XXX2 140 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 TMEM184AQ6ZMB5 413 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 C9orf40Q8IXQ3 194 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 OR4D6Q8NGJ1 314 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 OR1N1Q8NGS0 311 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 OR6N2Q8NGY6 317 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 OR2L2Q8NH16 312 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 SLC22A12Q96S37 553 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 DNAJC4Q9NNZ3 241 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 CYP8B1Q9UNU6 501 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 DHDHQ9UQ10 334 aa12.05□□□□□ -0.48
PABPC1-208ENST00000519004 POLR2AP24928 1970 aaKnown RBP12.04□□□□□ -0.48
PABPC1-208ENST00000519004 UTRNP46939 3433 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 PQBP1O60828 265 aaKnown RBP12.04□□□□□ -0.48
PABPC1-208ENST00000519004 GNB3P16520 340 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 FPR2P25090 351 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 ICAM4Q14773 271 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 ZIC1Q15915 447 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 NKAIN1Q4KMZ8 207 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 METRNLQ641Q3 311 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 TPGS2Q68CL5 300 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 FDX2Q6P4F2 183 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 GLB1LQ6UWU2 654 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms