RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	ANXA2	P07355	339 aa	Known RBP	10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	MMP9	P14780	707 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	GRK5	P34947	590 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	GYS2	P54840	703 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	FAM3A	P98173	230 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	HOXA4	Q00056	320 aa	Predicted RBP	10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	PPP1R8	Q12972	351 aa	Known RBP	10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	TRIM25	Q14258	630 aa	Known RBP	10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	TIGD6	Q17RP2	521 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	DEFB112	Q30KQ8	113 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	TEX36	Q5VZQ5	186 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	C16orf87	Q6PH81	154 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	SPATC1	Q76KD6	591 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	SLC16A9	Q7RTY1	509 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	FAM90A1	Q86YD7	464 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	TMEM86B	Q8N661	226 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	BOLL	Q8N9W6	283 aa	Known RBP	10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	OR52H1	Q8NGJ2	320 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	ASB9	Q96DX5	294 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	PCGF1	Q9BSM1	259 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	SLITRK2	Q9H156	845 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	MARCH7	Q9H992	704 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	RNPEPL1	Q9HAU8	725 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	NOX4	Q9NPH5	578 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	KAAG1	Q9UBP8	84 aa		10.23	□□□□□ -0.77
CDK18-223	ENST00000515514	PRPF19	Q9UMS4	504 aa	Known RBP	10.23	□□□□□ -0.77
CDK18-223	ENST00000515514		B2RBV5	119 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	TNFRSF13B	O14836	293 aa	Predicted RBP	10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	TOX4	O94842	621 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	ECD	O95905	644 aa	Predicted RBP	10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	LHB	P01229	141 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	GRP	P07492	148 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	SFTPB	P07988	381 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	RAP2A	P10114	183 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	PAICS	P22234	425 aa	Known RBP	10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	CALB2	P22676	271 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	GSTT1	P30711	240 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	OPRL1	P41146	370 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	PDCD1	Q15116	288 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	SNCB	Q16143	134 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	METTL11B	Q5VVY1	283 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	ZNF826P	Q6ZT77	177 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	SHF	Q7M4L6	423 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	PRSS45	Q7RTY3	260 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	DPY19L4	Q7Z388	723 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	ERI1	Q8IV48	349 aa	Known RBP	10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	FTMT	Q8N4E7	242 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	GATAD2B	Q8WXI9	593 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	ZDHHC16	Q969W1	377 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	REEP6	Q96HR9	211 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	WDFY2	Q96P53	400 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	TBX15	Q96SF7	602 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	NIPSNAP1	Q9BPW8	284 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	ABHD6	Q9BV23	337 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	RGCC	Q9H4X1	137 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	MMP24	Q9Y5R2	645 aa		10.22	□□□□□ -0.77
CDK18-223	ENST00000515514	SOX21	Q9Y651	276 aa	Predicted RBP	10.22	□□□□□ -0.77
CDK18-223	ENST00000515514		A0A1B0GUS0	222 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	FAM183A	A6NL82	134 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514		H3BN98	237 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	GLCE	O94923	617 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	GYPA	P02724	150 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	MUC1	P15941	1255 aa	Predicted RBP	10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	HOXB6	P17509	224 aa	Known RBP	10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	MDK	P21741	143 aa	Predicted RBP	10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	GNAL	P38405	381 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	ZNF121	P58317	390 aa	Predicted RBP	10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	RPL15	P61313	204 aa	Known RBP	10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	MICB	Q29980	383 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	RUSC1-AS1	Q66K80	236 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514		Q6YL49	198 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	FAM57B	Q71RH2	274 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	WDR86	Q86TI4	376 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	TIGD4	Q8IY51	512 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	IQCF1	Q8N6M8	205 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	CSNK2A3	Q8NEV1	391 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	OR1M1	Q8NGA1	313 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	GIPC3	Q8TF64	312 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	LRRC29	Q8WV35	223 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	TMIGD2	Q96BF3	282 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	C12orf43	Q96C57	262 aa	Known RBP	10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	CCDC124	Q96CT7	223 aa	Known RBP	10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	NSL1	Q96IY1	281 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	FAM71F1	Q96KD3	344 aa	Predicted RBP	10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	LRGUK	Q96M69	825 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	FEV	Q99581	238 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	PAPOLG	Q9BWT3	736 aa	Known RBP	10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	SIRPD	Q9H106	197 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	TLNRD1	Q9H1K6	362 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	OR10A2	Q9H208	303 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	MED20	Q9H944	212 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	ABCB9	Q9NP78	766 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	N6AMT1	Q9Y5N5	214 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	POMT1	Q9Y6A1	747 aa		10.21	□□□□□ -0.77
CDK18-223	ENST00000515514	IGHV1-69D	A0A0B4J2H0	117 aa		10.2	□□□□□ -0.78
CDK18-223	ENST00000515514	CENPVL3	A0A0U1RRI6	287 aa		10.2	□□□□□ -0.78
CDK18-223	ENST00000515514	ANXA2P2	A6NMY6	339 aa		10.2	□□□□□ -0.78
CDK18-223	ENST00000515514	DVL1	O14640	695 aa		10.2	□□□□□ -0.78
CDK18-223	ENST00000515514	PRODH	O43272	600 aa		10.2	□□□□□ -0.78
CDK18-223	ENST00000515514	WIPF1	O43516	503 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms