RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PLBD1Q6P4A8 553 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 GCSAMQ8N6F7 178 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 PAPD5Q8NDF8 572 aaKnown RBP8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 OTOSQ8NHW6 89 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 BCAS4Q8TDM0 211 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 OTULINQ96BN8 352 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 SGK3Q96BR1 496 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 ZMYND19Q96E35 227 aaPredicted RBP8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 REEP6Q96HR9 211 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 C1orf147Q96MC9 270 aaPredicted RBP8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 ZNF48Q96MX3 618 aaPredicted RBP8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 NUDT16L1Q9BRJ7 211 aaKnown RBP8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 OR51V1Q9H2C8 321 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 YY1AP1Q9H869 796 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 ZMAT3Q9HA38 289 aaKnown RBP8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 SLC25A19Q9HC21 320 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 TRIM36Q9NQ86 728 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 C14orf119Q9NWQ9 140 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 C1orf123Q9NWV4 160 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 DNAJC27Q9NZQ0 273 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 N6AMT1Q9Y5N5 214 aa8.71□□□□□ -1.02
HMGXB3-205ENST00000514469 TRAV40A0A0B4J280 105 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 KIR2DS1A0A191URI9 304 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 OOEPA6NGQ2 149 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 DNAJC9-AS1A6NH13 148 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 ANKRD30BLA7E2S9 258 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 C22orf46C9J442 243 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 C3orf80F5H4A9 247 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 ENSAO43768 121 aaKnown RBP8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 SELENOFO60613 162 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 DNAJC8O75937 253 aaPredicted RBP8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 LHBP01229 141 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 HMGN1P05114 100 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 LYNP07948 512 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 H2BFMP0C1H6 154 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 ANXA8P13928 327 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 CFL1P23528 166 aaKnown RBP8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 OR8B8Q15620 311 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 SLC35D3Q5M8T2 416 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 TEX36Q5VZQ5 186 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 SFRP4Q6FHJ7 346 aaPredicted RBP8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 RBMS3Q6XE24 437 aaKnown RBP8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 FAM57BQ71RH2 274 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 WDR86Q86TI4 376 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 SPATA24Q86W54 205 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 BCL6BQ8N143 479 aaPredicted RBP8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 ZNF454Q8N9F8 522 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 OR52H1Q8NGJ2 320 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 DNAJC9Q8WXX5 260 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 GCDHQ92947 438 aaPredicted RBP8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 OR10A2Q9H208 303 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 MMADHCQ9H3L0 296 aaPredicted RBP8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 RGCCQ9H4X1 137 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 ZNF556Q9HAH1 456 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 ZNF319Q9P2F9 582 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 DNAJB9Q9UBS3 223 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 POMPQ9Y244 141 aa8.7□□□□□ -1.02
HMGXB3-205ENST00000514469 IGHV3OR16-10A0A075B7F0 116 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 TRAV38-1A0A0B4J264 116 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 A6NLC8 198 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 TIPRLO75663 272 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 GRPP07492 148 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 EGR1P18146 543 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 PRKACGP22612 351 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 PRTN3P24158 256 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 NAA10P41227 235 aaPredicted RBP8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 GSK3AP49840 483 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 PSMA6P60900 246 aaKnown RBP8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 GFOD2Q3B7J2 385 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 ZNF826PQ6ZT77 177 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 FAM90A1Q86YD7 464 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 CPOQ8IVL8 374 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 C11orf53Q8IXP5 236 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 BOLLQ8N9W6 283 aaKnown RBP8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 CSNK2A3Q8NEV1 391 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 BBS1Q8NFJ9 593 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 OR1M1Q8NGA1 313 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 OR8S1Q8NH09 359 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 PGAM5Q96HS1 289 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 TECTBQ96PL2 329 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 MS4A7Q9GZW8 240 aaPredicted RBP8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 TLNRD1Q9H1K6 362 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 SMURF1Q9HCE7 757 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 ERVK-18Q9QC07 812 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 KLHDC2Q9Y2U9 406 aa8.69□□□□□ -1.02
HMGXB3-205ENST00000514469 hCG_1807616A0A1W2PRN6 198 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 CCDC182A6NF36 153 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 CLDN34H7C241 214 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 ADAM20O43506 726 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 NDUFA2O43678 99 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 FCN3O75636 299 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 GYPAP02724 150 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 RNASE1P07998 156 aaKnown RBP8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 HKR1P10072 659 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 ACKR3P25106 362 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 FGF12P61328 243 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 CSNK2BP67870 215 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 BAMBIQ13145 260 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 SNCBQ16143 134 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 AWAT1Q58HT5 328 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms