RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 LOC102724200A0A096LPH7 203 aaPredicted RBP0.37□□□□□ -2.35
PDGFC-208ENST00000512711 SMCO2A6NFE2 343 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 LYRM9A8MSI8 78 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 GGTLC3B5MD39 225 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 D6RAR5 112 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 GMFGO60234 142 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 NOL3O60936 208 aaKnown RBP0.37□□□□□ -2.35
PDGFC-208ENST00000512711 AQP8O94778 261 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 KCNK2O95069 426 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 CDS2O95674 445 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 FGFR1OPO95684 399 aaKnown RBP0.37□□□□□ -2.35
PDGFC-208ENST00000512711 OR5AC1P0C628 307 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 MCF2P10911 925 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 FOXN2P32314 431 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 OR12D2P58182 307 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 PRB3Q04118 309 aaPredicted RBP0.37□□□□□ -2.35
PDGFC-208ENST00000512711 BST1Q10588 318 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 ART3Q13508 389 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 CDC37Q16543 378 aaPredicted RBP0.37□□□□□ -2.35
PDGFC-208ENST00000512711 TTC19Q6DKK2 380 aaPredicted RBP0.37□□□□□ -2.35
PDGFC-208ENST00000512711 RTL4Q6ZR62 310 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 SLC25A29Q8N8R3 303 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 ZFP62Q8NB50 900 aaPredicted RBP0.37□□□□□ -2.35
PDGFC-208ENST00000512711 C19orf18Q8NEA5 215 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 OR52M1Q8NGK5 317 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 OR6Q1Q8NGQ2 317 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 DCAKDQ8WVC6 231 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.37□□□□□ -2.354e-7■■■■■ 58.1
PDGFC-208ENST00000512711 FXYD5Q96DB9 178 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 FBXO8Q9NRD0 319 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 CLN8Q9UBY8 286 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 STARD10Q9Y365 291 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 SLC22A7Q9Y694 548 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 ADGRB3O60242 1522 aa0.37□□□□□ -2.35
PDGFC-208ENST00000512711 MPDZO75970 2070 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 IGHV3OR16-9A0A0B4J2B5 98 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 H0YCG3 227 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 RAD51CO43502 376 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 CDH16O75309 829 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 SPAG6O75602 509 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 FARS2O95363 451 aaKnown RBP0.36□□□□□ -2.35
PDGFC-208ENST00000512711 PGA5P0DJD9 388 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 CT45A6P0DMU7 189 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 CT45A5P0DMU8 189 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 CT45A7P0DMV0 189 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 MX1P20591 662 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 MPIP34949 423 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 GGT2P36268 569 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 OR1G1P47890 313 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 EIF3EP60228 445 aaKnown RBP0.36□□□□□ -2.35
PDGFC-208ENST00000512711 MRPL23Q16540 153 aaKnown RBP0.36□□□□□ -2.35
PDGFC-208ENST00000512711 CT45A1Q5HYN5 189 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 CERS6Q6ZMG9 384 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 Q6ZSR6 202 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 BHLHE23Q8NDY6 225 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 CT45A3Q8NHU0 189 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 ITLN2Q8WWU7 325 aaPredicted RBP0.36□□□□□ -2.35
PDGFC-208ENST00000512711 RERGQ96A58 199 aaPredicted RBP0.36□□□□□ -2.35
PDGFC-208ENST00000512711 S100PBPQ96BU1 408 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 SLC39A3Q9BRY0 314 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 RETNQ9HD89 108 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 OR2S2Q9NQN1 319 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 PISDQ9UG56 409 aa0.36□□□□□ -2.35
PDGFC-208ENST00000512711 ATG2BQ96BY7 2078 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 A0A0A6YYD5 115 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 TRGV4A0A0C4DH28 118 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 CENPBD1B2RD01 187 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 AIM2O14862 343 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 GUCA1CO95843 209 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 TRBV12-3P01733 135 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 MAS1P04201 325 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 PGA4P0DJD7 388 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 PGA3P0DJD8 388 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 ZNF708P17019 499 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 GZMHP20718 246 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 USF1P22415 310 aaPredicted RBP0.35□□□□□ -2.35
PDGFC-208ENST00000512711 GLRA2P23416 452 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 HTR1DP28221 377 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 OR1E1P30953 314 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 ACLYP53396 1101 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 ZNF121P58317 390 aaPredicted RBP0.35□□□□□ -2.35
PDGFC-208ENST00000512711 FOXF1Q12946 379 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 CHIT1Q13231 466 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 DDX39BQ13838 428 aaKnown RBP0.35□□□□□ -2.35
PDGFC-208ENST00000512711 FAM104BQ5XKR9 115 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 KDM4DQ6B0I6 523 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 PAGE2Q7Z2X7 111 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 RAB3IL1Q8TBN0 382 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 CDS1Q92903 461 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 SLC25A44Q96H78 314 aaPredicted RBP0.35□□□□□ -2.35
PDGFC-208ENST00000512711 UQCC2Q9BRT2 126 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 SLC2A8Q9NY64 477 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 MTCH1Q9NZJ7 389 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 RAB22AQ9UL26 194 aa0.35□□□□□ -2.35
PDGFC-208ENST00000512711 DDX49Q9Y6V7 483 aaKnown RBP0.35□□□□□ -2.35
PDGFC-208ENST00000512711 GABRPO00591 440 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 SCAMP2O15127 329 aaKnown RBP0.34□□□□□ -2.36
PDGFC-208ENST00000512711 ENTPD6O75354 484 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 TROVE2P10155 538 aaKnown RBP eCLIP0.34□□□□□ -2.36
PDGFC-208ENST00000512711 IL3RAP26951 378 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms