RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 ATP6V1B1P15313 513 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ZNF12P17014 697 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 PCMT1P22061 227 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 USF1P22415 310 aaPredicted RBP6.38□□□□□ -1.39
NR1I3-231ENST00000512340 VAMP1P23763 118 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 MPV17P39210 176 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 RPS27P42677 84 aaKnown RBP6.38□□□□□ -1.39
NR1I3-231ENST00000512340 GPR6P46095 362 aaPredicted RBP6.38□□□□□ -1.39
NR1I3-231ENST00000512340 MAP2K3P46734 347 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ETV1P50549 477 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 MMP15P51511 669 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 CHN2P52757 468 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 CDH15P55291 814 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 PSMA6P60900 246 aaKnown RBP6.38□□□□□ -1.39
NR1I3-231ENST00000512340 CXCR4P61073 352 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ERVS71-1P61550 626 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ACTA2P62736 377 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ACTG2P63267 376 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 CCL8P80075 99 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 EFNB1P98172 346 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 IL5RAQ01344 420 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ROM1Q03395 351 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 RAB40BQ12829 278 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 TNK1Q13470 666 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 DCTN2Q13561 401 aaKnown RBP6.38□□□□□ -1.39
NR1I3-231ENST00000512340 MAD2L1BPQ15013 274 aaPredicted RBP6.38□□□□□ -1.39
NR1I3-231ENST00000512340 OR8G1Q15617 311 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 TSTQ16762 297 aaKnown RBP6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ALKBH6Q3KRA9 238 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 KRTAP27-1Q3LI81 207 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 Q3ZCU0 254 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 OTPQ5XKR4 325 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 LPCAT4Q643R3 524 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 OR2T2Q6IF00 324 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 C16orf54Q6UWD8 224 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 LYPD4Q6UWN0 246 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 Q6ZNX1 250 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 FAM57BQ71RH2 274 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 THAP5Q7Z6K1 395 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 LRP11Q86VZ4 500 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 C8orf59Q8N0T1 100 aaPredicted RBP6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ACBD7Q8N6N7 88 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ZNF525Q8N782 197 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 CELF2-AS1Q8N7Q2 184 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 YIPF7Q8N8F6 280 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 OR2Z1Q8NG97 314 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 OR8H1Q8NGG4 311 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 OR11L1Q8NGX0 322 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 OR8S1Q8NH09 359 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ENKURQ8TC29 256 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 OR8B4Q96RC9 309 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 SLC29A1Q99808 456 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 GAL3ST1Q99999 423 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 IFT22Q9H7X7 185 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 RNPEPL1Q9HAU8 725 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 NEK6Q9HC98 313 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 BRD7Q9NPI1 651 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 PNRC2Q9NPJ4 139 aaKnown RBP6.38□□□□□ -1.39
NR1I3-231ENST00000512340 TRIM36Q9NQ86 728 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 DNAJC27Q9NZQ0 273 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 MRPL15Q9P015 296 aaKnown RBP6.38□□□□□ -1.39
NR1I3-231ENST00000512340 IL19Q9UHD0 177 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 GTF2A1LQ9UNN4 478 aa6.38□□□□□ -1.39
NR1I3-231ENST00000512340 ACANP16112 2415 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 CSPG4Q6UVK1 2322 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 A0A0U1RQV5 110 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 MAGEA13PA6NCF6 341 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 CCDC182A6NF36 153 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 METTL15A6NJ78 407 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 CD300LBA8K4G0 201 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 LOC110117498-PIK3R3F6TDL0 507 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 H0YAE9 185 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 H0YJX3 145 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 SMAD7O15105 426 aaKnown RBP6.37□□□□□ -1.39
NR1I3-231ENST00000512340 PPIHO43447 177 aaKnown RBP6.37□□□□□ -1.39
NR1I3-231ENST00000512340 ENTPD6O75354 484 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 IGHV1-46P01743 117 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 HOXB4P17483 251 aaPredicted RBP6.37□□□□□ -1.39
NR1I3-231ENST00000512340 MYL12AP19105 171 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 CPT2P23786 658 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 GIFP27352 417 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 EPHA2P29317 976 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 POLR2IP36954 125 aaKnown RBP6.37□□□□□ -1.39
NR1I3-231ENST00000512340 CAPGP40121 348 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 CRYBB2P43320 205 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 NR4A2P43354 598 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 GZMKP49863 264 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 MMP16P51512 607 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 ZNF121P58317 390 aaPredicted RBP6.37□□□□□ -1.39
NR1I3-231ENST00000512340 POLR2GP62487 172 aaKnown RBP eCLIP6.37□□□□□ -1.39
NR1I3-231ENST00000512340 CSNK2BP67870 215 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 LOXL1Q08397 574 aaPredicted RBP6.37□□□□□ -1.39
NR1I3-231ENST00000512340 CDK5R2Q13319 367 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 GK2Q14410 553 aaPredicted RBP6.37□□□□□ -1.39
NR1I3-231ENST00000512340 KCNJ8Q15842 424 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 CNPY1Q3B7I2 92 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 GFOD2Q3B7J2 385 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 IGSF11Q5DX21 431 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 BCL2L15Q5TBC7 163 aa6.37□□□□□ -1.39
NR1I3-231ENST00000512340 OGFRL1Q5TC84 451 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms