RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 NAT6Q93015 286 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 PGAM5Q96HS1 289 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 BANF2Q9H503 90 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 WDR54Q9H977 334 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 AKIRIN1Q9H9L7 192 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 HOXD4P09016 255 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 ZNF17P17021 662 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 LSM6P62312 80 aaKnown RBP15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 TAGLNQ01995 201 aaKnown RBP15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 ATXN7L3Q14CW9 347 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 PNLIPRP3Q17RR3 467 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 INO80EQ8NBZ0 244 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 RELL2Q8NC24 303 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 TERB2Q8NHR7 220 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 MARCH1Q8TCQ1 289 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 FBXW5Q969U6 566 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 C1orf147Q96MC9 270 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 DMRTA2Q96SC8 542 aa15.83■□□□□ 0.12
CCHCR1-228ENST00000509552 NAT1P18440 290 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 KLK2P20151 261 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 CSNK1A1P48729 337 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 PCOLCEQ15113 449 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 PLAC9Q5JTB6 97 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 OPN5Q6U736 354 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 RTN4RL2Q86UN3 420 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 GTPBP8Q8N3Z3 284 aaPredicted RBP15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 ARRDC1Q8N5I2 433 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 OR2I1PQ8NGU4 316 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 HLA-CQ95604 372 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 ZNF416Q9BWM5 594 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 ZNF471Q9BX82 626 aaPredicted RBP15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 RASL12Q9NYN1 266 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 TEX46H3BTG2 121 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 LGALS8O00214 317 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 MSR1P21757 451 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 LUMP51884 338 aaPredicted RBP15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 MICBQ29980 383 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 VAX1Q5SQQ9 334 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 OR14K1Q8NGZ2 314 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 ZNF160Q9HCG1 818 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 ANAPC10Q9UM13 185 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 SIT1Q9Y3P8 196 aa15.82■□□□□ 0.12
CCHCR1-228ENST00000509552 RNF222A6NCQ9 220 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 C5orf51A6NDU8 294 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 EEF1E1-BLOC1S5C9J1V9 151 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 FGF5P12034 268 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 CTSSP25774 331 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 CBX5P45973 191 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 ECH1Q13011 328 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 HLA-BQ31612 363 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 SPERTQ8NA61 448 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 GJC3Q8NFK1 279 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 OR10K1Q8NGX5 313 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 PHYHIPLQ96FC7 376 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 SHARPINQ9H0F6 387 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 GLS2Q9UI32 602 aa15.81■□□□□ 0.12
CCHCR1-228ENST00000509552 LOC102723996A0A087X1L8 192 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 EIF1BO60739 113 aaKnown RBP15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 TMEM50BP56557 158 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 EIF3IQ13347 325 aaKnown RBP15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 ARFRP1Q13795 201 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 IL11RAQ14626 422 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 TMEM128Q5BJH2 165 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 BEX5Q5H9J7 111 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 OCSTAMPQ9BR26 566 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 OR10A2Q9H208 303 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 NELFAQ9H3P2 528 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 FN3KRPQ9HA64 309 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 FSCN3Q9NQT6 498 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 GHRLQ9UBU3 117 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 GPR160Q9UJ42 338 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 KLK3P07288 261 aaPredicted RBP15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 OR51T1Q8NGJ9 327 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 OR5H2Q8NGV7 314 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 ARHGAP5-AS1Q96IT6 56 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 SCGB3A2Q96PL1 93 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 WDR13Q9H1Z4 485 aa15.8■□□□□ 0.12
CCHCR1-228ENST00000509552 IGHV1-45A0A0A0MS14 117 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 IGKV1-9A0A0C4DH69 117 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 C13orf42A0A1B0GVH6 325 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 A0A1W2PP11 408 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 NPIPA2E9PIF3 369 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 NPIPA3F8WFD2 350 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 VAMP5O95183 116 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 ANOS1P23352 680 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 SLC6A9P48067 706 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 H3F3AP84243 136 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 CYCSP99999 105 aaKnown RBP15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 EXT1Q16394 746 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 TMEM17Q86X19 198 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 ARMC10Q8N2F6 343 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 NAA11Q9BSU3 229 aaPredicted RBP15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 DNTTIP1Q9H147 329 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 GAREM1Q9H706 876 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 DBX1A6NMT0 343 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 F5H5K5 113 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 MFNGO00587 321 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 BET1O15155 118 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 WDPCPO95876 746 aa15.79■□□□□ 0.12
CCHCR1-228ENST00000509552 CELA2AP08217 269 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms