RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 GFOD2Q3B7J2 385 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 METTL11BQ5VVY1 283 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 OR2T5Q6IEZ7 315 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 DPY19L4Q7Z388 723 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 ERI1Q8IV48 349 aaKnown RBP12.77□□□□□ -0.37
TPM3-219ENST00000509409 OR6N2Q8NGY6 317 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 OR2T29Q8NH02 315 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 REEP6Q96HR9 211 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 NSL1Q96IY1 281 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 WDFY2Q96P53 400 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 DGCR6LQ9BY27 220 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 NMNAT2Q9BZQ4 307 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 TOR3AQ9H497 397 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 MAGIXQ9H6Y5 334 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 MED20Q9H944 212 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 MARCH7Q9H992 704 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 NOX4Q9NPH5 578 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 DNAJC27Q9NZQ0 273 aa12.77□□□□□ -0.37
TPM3-219ENST00000509409 TCRBV5S2A0A599 114 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 FAM181BA6NEQ2 426 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 SRRM5B3KS81 715 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 H3BN98 237 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 TNFRSF13BO14836 293 aaPredicted RBP12.76□□□□□ -0.37
TPM3-219ENST00000509409 APOC1P02654 83 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 GSTT1P30711 240 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 ARF6P62330 175 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 FIP1L1Q6UN15 594 aaKnown RBP12.76□□□□□ -0.37
TPM3-219ENST00000509409 Q6YL49 198 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 FAM57BQ71RH2 274 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 BTN2A1Q7KYR7 527 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 SLC16A9Q7RTY1 509 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 GCSAMQ8N6F7 178 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 TEX47Q8TBZ9 253 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 GATAD2BQ8WXI9 593 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 ST8SIA4Q92187 359 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 LHX4Q969G2 390 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 SPSB4Q96A44 273 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 SGK3Q96BR1 496 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 FAM71F1Q96KD3 344 aaPredicted RBP12.76□□□□□ -0.37
TPM3-219ENST00000509409 LRGUKQ96M69 825 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 INTS14Q96SY0 518 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 OR10A2Q9H208 303 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 MUC13Q9H3R2 512 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 BRD7Q9NPI1 651 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 VNN3Q9NY84 501 aa12.76□□□□□ -0.37
TPM3-219ENST00000509409 CENPVL3A0A0U1RRI6 287 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 FAM183AA6NL82 134 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 DVL1O14640 695 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 H2BFMP0C1H6 154 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 POU1F1P28069 291 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 GNALP38405 381 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 FAM3AP98173 230 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 TRIM25Q14258 630 aaKnown RBP12.75□□□□□ -0.37
TPM3-219ENST00000509409 PDCD1Q15116 288 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 MICBQ29980 383 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 SHFQ7M4L6 423 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 FAM90A1Q86YD7 464 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.75□□□□□ -0.37
TPM3-219ENST00000509409 ARHGAP24Q8N264 748 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 OR10G2Q8NGC3 310 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 LRRC29Q8WV35 223 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 PGAM5Q96HS1 289 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 TBX15Q96SF7 602 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 NIPSNAP1Q9BPW8 284 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 SLITRK2Q9H156 845 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 OR51V1Q9H2C8 321 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 PRDM13Q9H4Q3 707 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 CNTD2Q9H8S5 307 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 BEX1Q9HBH7 125 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 SMURF1Q9HCE7 757 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 CMC2Q9NRP2 79 aa12.75□□□□□ -0.37
TPM3-219ENST00000509409 TRRAPQ9Y4A5 3859 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 GNGT2O14610 69 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 ECDO95905 644 aaPredicted RBP12.74□□□□□ -0.37
TPM3-219ENST00000509409 KNG1P01042 644 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 LHBP01229 141 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 MMP9P14780 707 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 PAICSP22234 425 aaKnown RBP12.74□□□□□ -0.37
TPM3-219ENST00000509409 CFL1P23528 166 aaKnown RBP12.74□□□□□ -0.37
TPM3-219ENST00000509409 NAA10P41227 235 aaPredicted RBP12.74□□□□□ -0.37
TPM3-219ENST00000509409 ZNF121P58317 390 aaPredicted RBP12.74□□□□□ -0.37
TPM3-219ENST00000509409 MS4A2Q01362 244 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 LINC01590Q5TEZ4 76 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 TEX36Q5VZQ5 186 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 LCN8Q6JVE9 175 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 PDZD9Q8IXQ8 264 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 IQCF1Q8N6M8 205 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 KIR3DL3Q8N743 410 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 SCCPDHQ8NBX0 429 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 OR1M1Q8NGA1 313 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 OR52H1Q8NGJ2 320 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 OR4F5Q8NH21 305 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 TBC1D15Q8TC07 691 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 GIPC3Q8TF64 312 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 CCL13Q99616 98 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 MICU1Q9BPX6 476 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 ABHD6Q9BV23 337 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 RNPEPL1Q9HAU8 725 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 MGAM2Q2M2H8 2515 aa12.74□□□□□ -0.37
TPM3-219ENST00000509409 DOCK11Q5JSL3 2073 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms