RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 MICBQ29980 383 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 OXLD1Q5BKU9 147 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 SMARCD3Q6STE5 483 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 OR4K13Q8NH42 304 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 PPP1R35Q8TAP8 253 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 SAR1AQ9NR31 198 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 C14orf119Q9NWQ9 140 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 CMTM6Q9NX76 183 aa13.09□□□□□ -0.31
CXCL1-202ENST00000509101 TRBV4-1A0A0J9YWV2 114 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 A0A1W2PRQ8 180 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 ACOT8O14734 319 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 GSTA4O15217 222 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 SELLP14151 372 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 MUC1P15941 1255 aaPredicted RBP13.08□□□□□ -0.32
CXCL1-202ENST00000509101 HIST1H1CP16403 213 aaKnown RBP13.08□□□□□ -0.32
CXCL1-202ENST00000509101 GYS2P54840 703 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 LOXL3P58215 753 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 CSNK2BP67870 215 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 MZT1Q08AG7 82 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 DGCR6Q14129 220 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 SEC23BQ15437 767 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 LY6EQ16553 131 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 SLC36A1Q7Z2H8 476 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 WDR86Q86TI4 376 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 ZBTB46Q86UZ6 589 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 LYG1Q8N1E2 194 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 SDR9C7Q8NEX9 313 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 OR4C13Q8NGP0 309 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 OR8S1Q8NH09 359 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 CFHR4Q92496 578 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.32
CXCL1-202ENST00000509101 PPP1R14AQ96A00 147 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 ITPKCQ96DU7 683 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 SEH1LQ96EE3 360 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 DCTN5Q9BTE1 182 aa13.08□□□□□ -0.32
CXCL1-202ENST00000509101 NSRP1Q9H0G5 558 aaKnown RBP13.08□□□□□ -0.32
CXCL1-202ENST00000509101 KRCC1Q9NPI7 259 aaPredicted RBP13.08□□□□□ -0.32
CXCL1-202ENST00000509101 AURKAIP1Q9NWT8 199 aaPredicted RBP13.08□□□□□ -0.32
CXCL1-202ENST00000509101 MRPL22Q9NWU5 206 aaKnown RBP13.08□□□□□ -0.32
CXCL1-202ENST00000509101 PRPF19Q9UMS4 504 aaKnown RBP13.08□□□□□ -0.32
CXCL1-202ENST00000509101 COL7A1Q02388 2944 aa13.07□□□□□ -0.32
CXCL1-202ENST00000509101 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.07□□□□□ -0.32
CXCL1-202ENST00000509101 NDUFB3O43676 98 aa13.07□□□□□ -0.32
CXCL1-202ENST00000509101 SLC2A1P11166 492 aa13.07□□□□□ -0.32
CXCL1-202ENST00000509101 LIPEQ05469 1076 aa13.07□□□□□ -0.32
CXCL1-202ENST00000509101 DRAM2Q6UX65 266 aa13.07□□□□□ -0.32
CXCL1-202ENST00000509101 DPY19L4Q7Z388 723 aa13.07□□□□□ -0.32
CXCL1-202ENST00000509101 TNFRSF14Q92956 283 aa13.07□□□□□ -0.32
CXCL1-202ENST00000509101 RCN3Q96D15 328 aa13.07□□□□□ -0.32
CXCL1-202ENST00000509101 OR52D1Q9H346 318 aa13.07□□□□□ -0.32
CXCL1-202ENST00000509101 N6AMT1Q9Y5N5 214 aa13.07□□□□□ -0.32
CXCL1-202ENST00000509101 OR6C68A6NDL8 312 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 DIRAS1O95057 198 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 PSKH1P11801 424 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 ZNF823P16415 610 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 SLC6A6P31641 620 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 OTX1P32242 354 aaPredicted RBP13.06□□□□□ -0.32
CXCL1-202ENST00000509101 GRK5P34947 590 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 PRKXP51817 358 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 GMFBP60983 142 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 NSUN5P1Q3KNT7 163 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 LRRC10Q5BKY1 277 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 C11orf88Q6PI97 169 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 WDR82Q6UXN9 313 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 ARPINQ7Z6K5 226 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 C11orf53Q8IXP5 236 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 BEND2Q8NDZ0 799 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 OR52J3Q8NH60 311 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 OR2T6Q8NHC8 308 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 SGCDQ92629 289 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 FAM162AQ96A26 154 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 CLPTM1LQ96KA5 538 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 DMRTB1Q96MA1 342 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 COPS4Q9BT78 406 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 IFT27Q9BW83 186 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 RNPEPL1Q9HAU8 725 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 MRGBPQ9NV56 204 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 NECAP2Q9NVZ3 263 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 KCNG2Q9UJ96 466 aa13.06□□□□□ -0.32
CXCL1-202ENST00000509101 FAM32AQ9Y421 112 aaKnown RBP13.06□□□□□ -0.32
CXCL1-202ENST00000509101 TVP23AA6NH52 213 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 ANKRD30BLA7E2S9 258 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 ARPC3O15145 178 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 XPNPEP2O43895 674 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 VSIG10L2P0DP72 767 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 NCK1P16333 377 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 AMY2BP19961 511 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 NOS3P29474 1203 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 PYCR1P32322 319 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 KIR2DS4P43632 304 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 UBE2E1P51965 193 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 STUMQ69YW2 141 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 SLC15A3Q8IY34 581 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 OR1M1Q8NGA1 313 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 OR5T2Q8NGG2 359 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 C8orf46Q8TAG6 207 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 C17orf50Q8WW18 174 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 RORBQ92753 470 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 SSX3Q99909 188 aa13.05□□□□□ -0.32
CXCL1-202ENST00000509101 OPA3Q9H6K4 179 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms