RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 GFOD2Q3B7J2 385 aa11.89□□□□□ -0.51
RAB28-205ENST00000508274 BTNL3Q6UXE8 466 aa11.89□□□□□ -0.51
RAB28-205ENST00000508274 WDR86Q86TI4 376 aa11.89□□□□□ -0.51
RAB28-205ENST00000508274 PARP8Q8N3A8 854 aa11.89□□□□□ -0.51
RAB28-205ENST00000508274 BBS1Q8NFJ9 593 aa11.89□□□□□ -0.51
RAB28-205ENST00000508274 SGK3Q96BR1 496 aa11.89□□□□□ -0.51
RAB28-205ENST00000508274 REEP6Q96HR9 211 aa11.89□□□□□ -0.51
RAB28-205ENST00000508274 C1orf147Q96MC9 270 aaPredicted RBP11.89□□□□□ -0.51
RAB28-205ENST00000508274 MMADHCQ9H3L0 296 aaPredicted RBP11.89□□□□□ -0.51
RAB28-205ENST00000508274 OPA3Q9H6K4 179 aa11.89□□□□□ -0.51
RAB28-205ENST00000508274 TCRBV3S1A0A5B6 114 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 DNAJC9-AS1A6NH13 148 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 PRR23D1E9PI22 279 aaPredicted RBP11.88□□□□□ -0.51
RAB28-205ENST00000508274 PHYHO14832 338 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 FKBP6O75344 327 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 PRR23D2P0DMB1 279 aaPredicted RBP11.88□□□□□ -0.51
RAB28-205ENST00000508274 OSMP13725 252 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 EGR1P18146 543 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 PAICSP22234 425 aaKnown RBP11.88□□□□□ -0.51
RAB28-205ENST00000508274 CPT2P23786 658 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 NAA10P41227 235 aaPredicted RBP11.88□□□□□ -0.51
RAB28-205ENST00000508274 COMPP49747 757 aaPredicted RBP11.88□□□□□ -0.51
RAB28-205ENST00000508274 CBX1P83916 185 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 CDK5Q00535 292 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 DNAL1Q4LDG9 190 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 DMRTA1Q5VZB9 504 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 TMEM236Q5W0B7 351 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 LRRN1Q6UXK5 716 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 DOK3Q7L591 496 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 GCSAMQ8N6F7 178 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 UPRTQ96BW1 309 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 TECTBQ96PL2 329 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 NUDT16L1Q9BRJ7 211 aaKnown RBP11.88□□□□□ -0.51
RAB28-205ENST00000508274 TOR3AQ9H497 397 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 NTN4Q9HB63 628 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 FAM53CQ9NYF3 392 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 POMPQ9Y244 141 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 KLHDC2Q9Y2U9 406 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 hCG_1807616A0A1W2PRN6 198 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 ANKRD30BLA7E2S9 258 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 LGALS8O00214 317 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 FCN3O75636 299 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 PLATP00750 562 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 H2BFMP0C1H6 154 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 POU4F2Q12837 409 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 OR8B8Q15620 311 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 SHFQ7M4L6 423 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 CPOQ8IVL8 374 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 OTOSQ8NHW6 89 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 MS4A7Q9GZW8 240 aaPredicted RBP11.88□□□□□ -0.51
RAB28-205ENST00000508274 ZNF556Q9HAH1 456 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 SMURF1Q9HCE7 757 aa11.88□□□□□ -0.51
RAB28-205ENST00000508274 IGHV3OR15-7A0A075B7D8 119 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.87□□□□□ -0.51
RAB28-205ENST00000508274 KIR2DS1A0A191URI9 304 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 MDFIC2A0A1B0GVS7 189 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 OOEPA6NGQ2 149 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 ADAM20O43506 726 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 GYPAP02724 150 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 LYNP07948 512 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 SLC2A5P22732 501 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 DDOSTP39656 456 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 FGF12P61328 243 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 CSNK2BP67870 215 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 ELF3P78545 371 aaPredicted RBP11.87□□□□□ -0.51
RAB28-205ENST00000508274 RBMS3Q6XE24 437 aaKnown RBP11.87□□□□□ -0.51
RAB28-205ENST00000508274 FAM90A1Q86YD7 464 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 C11orf53Q8IXP5 236 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 SPERTQ8NA61 448 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 PLPP7Q8NBV4 271 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 OR8S1Q8NH09 359 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 THEM6Q8WUY1 208 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 RASSF4Q9H2L5 321 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 DNAJB9Q9UBS3 223 aa11.87□□□□□ -0.51
RAB28-205ENST00000508274 A0A1B0GW55 424 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 TNFRSF13BO14836 293 aaPredicted RBP11.86□□□□□ -0.51
RAB28-205ENST00000508274 DNAJC8O75937 253 aaPredicted RBP11.86□□□□□ -0.51
RAB28-205ENST00000508274 DUX4L2P0CJ85 424 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 DUX4L3P0CJ86 424 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 DUX4L4P0CJ87 422 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 DUX4L5P0CJ88 424 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 DUX4L6P0CJ89 424 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 DUX4L7P0CJ90 424 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 PPIAL4GP0DN37 164 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 ANXA8P13928 327 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 PRTN3P24158 256 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 GSK3AP49840 483 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 HCCSP53701 268 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 DUX4L9Q6RFH8 374 aaPredicted RBP11.86□□□□□ -0.51
RAB28-205ENST00000508274 BRD3OSQ6XYD6 125 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 RHOUQ7L0Q8 258 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 FGFRL1Q8N441 504 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 PAPD5Q8NDF8 572 aaKnown RBP11.86□□□□□ -0.51
RAB28-205ENST00000508274 OR52H1Q8NGJ2 320 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 TAF15Q92804 592 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAB28-205ENST00000508274 PGAM5Q96HS1 289 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 PAPOLGQ9BWT3 736 aaKnown RBP11.86□□□□□ -0.51
RAB28-205ENST00000508274 OR10A2Q9H208 303 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 C14orf119Q9NWQ9 140 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms