RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ZNF319Q9P2F9 582 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 GTF2A1LQ9UNN4 478 aa11.07□□□□□ -0.64
TCOF1-209ENST00000506630 NOP16Q9Y3C1 178 aaKnown RBP11.07□□□□□ -0.64
TCOF1-209ENST00000506630 TMEM269A0A1B0GVZ9 245 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 ANKRD30BLA7E2S9 258 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 E9PQ18 207 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 ENTPD6O75354 484 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 ZNF254O75437 659 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 ANPEPP15144 967 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 CFL1P23528 166 aaKnown RBP11.06□□□□□ -0.64
TCOF1-209ENST00000506630 MMP16P51512 607 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 POU4F2Q12837 409 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 LRRC36Q1X8D7 754 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 ZNF771Q7L3S4 317 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-209ENST00000506630 MOGAT3Q86VF5 341 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 COMMD2Q86X83 199 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 GALNT4Q8N4A0 578 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 GAL3ST1Q99999 423 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 RGCCQ9H4X1 137 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 GCM1Q9NP62 436 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 SMPD3Q9NY59 655 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-209ENST00000506630 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.06□□□□□ -0.64
TCOF1-209ENST00000506630 NPTNQ9Y639 398 aa11.06□□□□□ -0.64
TCOF1-209ENST00000506630 LOC100130705A0A1B0GUX0 176 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 A0A1B0GWJ7 208 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 MAGEB4O15481 346 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-209ENST00000506630 SPRY1O43609 319 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-209ENST00000506630 TCF21O43680 179 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 GMDSO60547 372 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 TGFAP01135 160 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 PEX2P28328 305 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 DDOSTP39656 456 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 CD200P41217 278 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 GSK3AP49840 483 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 CDH15P55291 814 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 SNRPGP62308 76 aaKnown RBP11.05□□□□□ -0.64
TCOF1-209ENST00000506630 ROM1Q03395 351 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 EGR3Q06889 387 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 TMED1Q13445 227 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 PRAMEF6Q5VXH4 476 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 MEDAGQ5VYS4 303 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 LPCAT4Q643R3 524 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 C12orf54Q6X4T0 127 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 PLEKHG7Q6ZR37 379 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 SSX6Q7RTT6 188 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 LINC01356Q8N9X3 169 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 ZNF555Q8NEP9 628 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 RAB39BQ96DA2 213 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 APOL4Q9BPW4 351 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 PBOV1Q9GZY1 135 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 FAM118AQ9NWS6 357 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 FAM206AQ9NX38 181 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 UBAP1Q9NZ09 502 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 AASSQ9UDR5 926 aa11.05□□□□□ -0.64
TCOF1-209ENST00000506630 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-209ENST00000506630 SNTNA6NMZ2 147 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 FAM157AC9JC47 383 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 CYB5R3P00387 301 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-209ENST00000506630 IGHV2-70P01814 119 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 KRT8P05787 483 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 OR2T7P0C7T2 308 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 DCTDP32321 178 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 GNALP38405 381 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 MTNR1AP48039 350 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 MFGE8Q08431 387 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-209ENST00000506630 MAB21L1Q13394 359 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 ENTHD1Q8IYW4 607 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 YIPF7Q8N8F6 280 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 CSNK2A3Q8NEV1 391 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 OR2T27Q8NH04 317 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 OR8S1Q8NH09 359 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 RNFT2Q96EX2 444 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 LYZL4Q96KX0 146 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 RDH12Q96NR8 316 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 SIGLEC11Q96RL6 698 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 PAPOLGQ9BWT3 736 aaKnown RBP11.04□□□□□ -0.64
TCOF1-209ENST00000506630 ZNF665Q9H7R5 613 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 MOB1AQ9H8S9 216 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 LPAR2Q9HBW0 351 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 UFSP2Q9NUQ7 469 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 MRM2Q9UI43 246 aaKnown RBP11.04□□□□□ -0.64
TCOF1-209ENST00000506630 ZNF391Q9UJN7 358 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 R4GMQ9 66 aa11.04□□□□□ -0.64
TCOF1-209ENST00000506630 A0A0U1RQV5 110 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 A0A1W2PQL4 384 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-209ENST00000506630 ACOD1A6NK06 481 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 LRRC30A6NM36 301 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 LOC110117498-PIK3R3F6TDL0 507 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 TMEM178BH3BS89 294 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 IFNL4K9M1U5 179 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 MPZL2O60487 215 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 RPP14O95059 124 aaKnown RBP11.03□□□□□ -0.64
TCOF1-209ENST00000506630 PNPP00491 289 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 IGHV2-5P01817 119 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 IRF2P14316 349 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 GATA4P43694 442 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 LMO4P61968 165 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 BTG1P62324 171 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 MZT1Q08AG7 82 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 OR8B8Q15620 311 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms