RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CD200P41217 278 aa15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 SRP9P49458 86 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 OR8G1Q15617 311 aa15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 ZNF555Q8NEP9 628 aa15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 ZNF420Q8TAQ5 688 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 LGALS12Q96DT0 336 aa15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 PPP1R3EQ9H7J1 279 aa15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 G6PC2Q9NQR9 355 aa15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 NUFIP1Q9UHK0 495 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 R4GMQ9 66 aa15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 SONP18583 2426 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-216ENST00000506537 A0A0U1RQV5 110 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 WBP4O75554 376 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 DBTP11182 482 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 DDOSTP39656 456 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 PMELP40967 661 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 GATA4P43694 442 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 ADARB1P78563 741 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 C6orf52Q5T4I8 152 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 ZNF691Q5VV52 312 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 PRAMEF6Q5VXH4 476 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 MOGAT3Q86VF5 341 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 CYGBQ8WWM9 190 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 MSI2Q96DH6 328 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 SLC22A4Q9H015 551 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 AMBNQ9NP70 447 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 EXOGQ9Y2C4 368 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 RHBDD3Q9Y3P4 386 aa15.38■□□□□ 0.05
PDLIM7-216ENST00000506537 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.38■□□□□ 0.054e-13■■■■■ 28.5
PDLIM7-216ENST00000506537 SVEP1Q4LDE5 3571 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 MALRD1Q5VYJ5 2156 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 INAFM1C9JVW0 142 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 LOC110117498-PIK3R3F6TDL0 507 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 GMDSO60547 372 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 PTBP3O95758 552 aaKnown RBP15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 TTRP02766 147 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 KRT8P05787 483 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 GZMKP49863 264 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 ISL1P61371 349 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 LMO4P61968 165 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 SLC34A1Q06495 639 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 SLC3A1Q07837 685 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 SMN1Q16637 294 aaKnown RBP15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 CYB5R2Q6BCY4 276 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 CELF2-AS1Q8N7Q2 184 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 YIPF7Q8N8F6 280 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 OR51E1Q8TCB6 317 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 NRG4Q8WWG1 115 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 HPS1Q92902 700 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 RNF166Q96A37 237 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 TIMD4Q96H15 378 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 C1orf159Q96HA4 380 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 MOB1AQ9H8S9 216 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 ZNF391Q9UJN7 358 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 OR52A1Q9UKL2 312 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 NPTNQ9Y639 398 aa15.37■□□□□ 0.05
PDLIM7-216ENST00000506537 LOC100289279A0A1B0GTE1 492 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 METTL15A6NJ78 407 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 ANKRD30BLA7E2S9 258 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 TMEM178BH3BS89 294 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 SULT1C4O75897 302 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 RPP14O95059 124 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 CYB5R3P00387 301 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 IGHV2-70P01814 119 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 IL5RAQ01344 420 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 MPPED2Q15777 294 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 TP53I3Q53FA7 332 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 LIPNQ5VXI9 398 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 WDR86Q86TI4 376 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 DHRSXQ8N5I4 330 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 CSNK2A3Q8NEV1 391 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 CNIH3Q8TBE1 160 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 RAB1CQ92928 201 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 Q96MT0 163 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 ADI1Q9BV57 179 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 PAPOLGQ9BWT3 736 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 RNPEPL1Q9HAU8 725 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 GPR84Q9NQS5 396 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 ACOXLQ9NUZ1 547 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 GTF2A1LQ9UNN4 478 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 SLC22A13Q9Y226 551 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 MYRFQ9Y2G1 1151 aa15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 NOP16Q9Y3C1 178 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-216ENST00000506537 SNTNA6NMZ2 147 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 FAM157AC9JC47 383 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 GNAO1P09471 354 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 ACTC1P68032 377 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 ACTA1P68133 377 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 HOXA4Q00056 320 aaPredicted RBP15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 ZMYND11Q15326 602 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 CDONQ4KMG0 1287 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 BCL2L15Q5TBC7 163 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 TTC23Q5W5X9 447 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 CATSPERDQ86XM0 798 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 KLBQ86Z14 1044 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 ELMOD2Q8IZ81 293 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 Q8TCH9 128 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 RORBQ92753 470 aa15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 FAM71F1Q96KD3 344 aaPredicted RBP15.35■□□□□ 0.05
PDLIM7-216ENST00000506537 FGF23Q9GZV9 251 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms