RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PGA4P0DJD7 388 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 PGA3P0DJD8 388 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 HNRNPCL4P0DMR1 293 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 PRG2P13727 222 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 RAC2P15153 192 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 NQO1P15559 274 aaKnown RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 ARSBP15848 533 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 ZNF823P16415 610 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 GSTM3P21266 225 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 RPS4Y1P22090 263 aaKnown RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 CXCR1P25024 350 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 IL12AP29459 219 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 AQP1P29972 269 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 GRPRP30550 384 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 GGT2P36268 569 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 CSNK1A1P48729 337 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 GDI2P50395 445 aaKnown RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 NUDT2P50583 147 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 ZNF133P52736 654 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 XGP55808 180 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 MTPNP58546 118 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 GNGT1P63211 74 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 MXRA7P84157 204 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 CDK6Q00534 326 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 GUCY1A3Q02108 690 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 HSF2Q03933 536 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 PLP2Q04941 152 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 TNP2Q05952 138 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 FOXE3Q13461 319 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 CYLC2Q14093 348 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 KIAA0141Q14154 515 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 SEC23BQ15437 767 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 RGNQ15493 299 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 TAF11Q15544 211 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 KCNJ8Q15842 424 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 SSX2Q16385 188 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 SYPL1Q16563 259 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 LRRC23Q53EV4 343 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 ALG10BQ5I7T1 473 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 RPS26P11Q5JNZ5 115 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 LRIF1Q5T3J3 769 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 SWT1Q5T5J6 900 aaKnown RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 METTL21CQ5VZV1 264 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 WBP2NLQ6ICG8 309 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 OR2T2Q6IF00 324 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 ZNF770Q6IQ21 691 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 REEP3Q6NUK4 255 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 BLOC1S3Q6QNY0 202 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 FBXW12Q6X9E4 464 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 ZNF826PQ6ZT77 177 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 H1FNTQ75WM6 255 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 C16orf82Q7Z2V1 217 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 HDDC2Q7Z4H3 204 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 PIGWQ7Z7B1 504 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 CPLX4Q7Z7G2 160 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 PATL1Q86TB9 770 aaKnown RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 SNX32Q86XE0 403 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 UEVLDQ8IX04 471 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 LYPD1Q8N2G4 141 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 LRRC18Q8N456 261 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 DRAM1Q8N682 238 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 ANKFN1Q8N957 763 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 OR11H1Q8NG94 326 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 OR8J3Q8NGG0 315 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 OR5D13Q8NGL4 314 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 OR6Q1Q8NGQ2 317 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 OR13G1Q8NGZ3 307 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 NFKBIDQ8NI38 313 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 BCAS4Q8TDM0 211 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 TSPEARQ8WU66 669 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 C4orf3Q8WVX3 66 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 DNAJA4Q8WW22 397 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 LZICQ8WZA0 190 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 DCUN1D4Q92564 292 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 GTF2H4Q92759 462 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 SLC38A4Q969I6 547 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 SLC25A36Q96CQ1 311 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 NMD3Q96D46 503 aaKnown RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 SEH1LQ96EE3 360 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 MALSU1Q96EH3 234 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 DUS3LQ96G46 650 aaKnown RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 SEPHS2Q99611 448 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 CCL13Q99616 98 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 CGREF1Q99674 301 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 CPPED1Q9BRF8 314 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 OR2H1Q9GZK4 316 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 TINAGL1Q9GZM7 467 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 PAIP1Q9H074 479 aaKnown RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 SLC38A1Q9H2H9 487 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 CCDC134Q9H6E4 229 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 TMEM38AQ9H6F2 299 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 LIN7BQ9HAP6 207 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 KRCC1Q9NPI7 259 aaPredicted RBP2.54□□□□□ -2
TCOF1-208ENST00000506063 B3GAT2Q9NPZ5 323 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 ABCB10Q9NRK6 738 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 UFSP2Q9NUQ7 469 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 RNF7Q9UBF6 113 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 CRCT1Q9UGL9 99 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 LINC00527Q9UJ94 153 aa2.54□□□□□ -2
TCOF1-208ENST00000506063 ZNF232Q9UNY5 417 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms