RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 IGHV1-46P01743 117 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 HLA-DQA2P01906 255 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 TRAM1Q15629 374 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 ALKBH6Q3KRA9 238 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 TP53I3Q53FA7 332 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 BPIFB6Q8NFQ5 453 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR1J1Q8NGS3 322 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 SYNPRQ8TBG9 265 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 ERGIC1Q969X5 290 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 KCNS3Q9BQ31 491 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 EIF3KQ9UBQ5 218 aaKnown RBP7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 IL19Q9UHD0 177 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 POLR3KQ9Y2Y1 108 aaPredicted RBP7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 IGKV1-9A0A0C4DH69 117 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 TMEM269A0A1B0GVZ9 245 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZSCAN5BA6NJL1 495 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 C17orf100A8MU93 164 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 F5H0A9 414 aaPredicted RBP7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 CLPTM1O96005 669 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 UCHL1P09936 223 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 CRYBB2P43320 205 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZP1P60852 638 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 ERVK11-1P61568 191 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZNF718Q3SXZ3 478 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 AGAP6Q5VW22 663 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 TMPRSS11AQ6ZMR5 421 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 PHC2Q8IXK0 858 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 CSNK2A3Q8NEV1 391 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 MPC1Q9Y5U8 109 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 PRRC2AP48634 2157 aaKnown RBP7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 IFNL4K9M1U5 179 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 PIN1P1O15428 100 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 PSMA1P25786 263 aaKnown RBP7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 KLF3P57682 345 aaPredicted RBP7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 PAX5Q02548 391 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 MAB21L1Q13394 359 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 SPHARQ15513 63 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR5AS1Q8N127 324 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR13F1Q8NGS4 319 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 PPP1R14AQ96A00 147 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 FOXJ3Q9UPW0 622 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 UNC79Q9P2D8 2635 aa7.03□□□□□ -1.28
CDC42SE2-208ENST00000505065 ANKHD1Q8IWZ3 2542 aaKnown RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 TMEM210A6NLX4 147 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 APOL3O95236 402 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 F12P00748 615 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 GABRA5P31644 462 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 RPS7P62081 194 aaKnown RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 MOGQ16653 247 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 BCL2L15Q5TBC7 163 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 LRRTM1Q86UE6 522 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 MUC15Q8N387 334 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 ABHD4Q8TB40 342 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 CMBLQ96DG6 245 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 GFI1Q99684 422 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 AMBNQ9NP70 447 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 A1L4Q6 167 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 CD300LBA8K4G0 201 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 CASKO14936 926 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 NCR1O76036 304 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 GTF2A1P52655 376 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 HLXQ14774 488 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 TMEM244Q5VVB8 128 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 TEX36Q5VZQ5 186 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 SAXO1Q8IYX7 474 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 NEU4Q8WWR8 484 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 PP6455Q8WZ26 134 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 GTF3AQ92664 365 aaKnown RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 DERL3Q96Q80 235 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 OR51I2Q9H344 312 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 TRIM36Q9NQ86 728 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 FAIMQ9NVQ4 179 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 PTTG3PQ9NZH4 202 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 IL36GQ9NZH8 169 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 ZNF281Q9Y2X9 895 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 NOP16Q9Y3C1 178 aaKnown RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 LOC110117498-PIK3R3F6TDL0 507 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 TMEM127O75204 238 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 CEACAM21Q3KPI0 293 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 SPRNQ5BIV9 151 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 CEP78Q5JTW2 689 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 KRT80Q6KB66 452 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 DACT3Q96B18 629 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 ZC3HAV1LQ96H79 300 aaKnown RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 C1orf147Q96MC9 270 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 FBLN5Q9UBX5 448 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 PLEKHA6Q9Y2H5 1048 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 GRIP1Q9Y3R0 1128 aa7.02□□□□□ -1.29
CDC42SE2-208ENST00000505065 LOC100289279A0A1B0GTE1 492 aa7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 HSD11B1P28845 292 aa7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 GBX2P52951 348 aaPredicted RBP7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 FAM57BQ71RH2 274 aa7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 SVOPQ8N4V2 548 aa7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 YIPF7Q8N8F6 280 aa7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 OR10Z1Q8NGY1 313 aa7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 THRSPQ92748 146 aa7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 C1QTNF6Q9BXI9 259 aa7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 RBM38Q9H0Z9 239 aaKnown RBP7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 IFT22Q9H7X7 185 aa7.01□□□□□ -1.29
CDC42SE2-208ENST00000505065 GNG8Q9UK08 70 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms