RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TREM2Q9NZC2 230 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 ST3GAL6Q9Y274 331 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 ABCC11Q96J66 1382 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 FAM240AA0A1B0GVK7 77 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 FAM159BA6NKW6 160 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 RFXAPO00287 272 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 CST8O60676 142 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 GPR75O95800 540 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 GLUD1P00367 558 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 ARG1P05089 322 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 LGALS2P05162 132 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 USF1P22415 310 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-204ENST00000504430 F8A1P23610 371 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 FAM53BQ14153 422 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 C16orf52Q8NHV5 167 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 FRAT1Q92837 279 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-204ENST00000504430 SLC7A11Q9UPY5 501 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 DAPL1A0PJW8 107 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 ICOSLGO75144 302 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 PSG1P11464 419 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 IFI30P13284 250 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 BTCP35070 178 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 FABP6P51161 128 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 EIF4EBP2Q13542 120 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-204ENST00000504430 MS4A13Q5J8X5 152 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 DCST2Q5T1A1 773 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF626Q68DY1 528 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 OR2T5Q6IEZ7 315 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 OR2T29Q8NH02 315 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 OR1L3Q8NH93 324 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 LNX1Q8TBB1 728 aaPredicted RBP4.3□□□□□ -1.72
NIPBL-204ENST00000504430 SPACA5Q96QH8 159 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 PDCD1LG2Q9BQ51 273 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 SLC25A33Q9BSK2 321 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 CHST5Q9GZS9 411 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 TXNIPQ9H3M7 391 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 RGS18Q9NS28 235 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 MGAT4AQ9UM21 535 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 BTRCQ9Y297 605 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.3□□□□□ -1.72
NIPBL-204ENST00000504430 OR51B2Q9Y5P1 312 aa4.3□□□□□ -1.72
NIPBL-204ENST00000504430 C2orf16Q68DN1 1984 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 RBMY1BA6NDE4 496 aaKnown RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 RBMY1EA6NEQ0 496 aaKnown RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 H7C2Y5 167 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 SSNA1O43805 119 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 RBMY1DP0C7P1 496 aaKnown RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ZDHHC11BP0C7U3 371 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 RBMY1A1P0DJD3 496 aaKnown RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 IGHV4-30-4P0DP06 118 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 H2AFXP16104 143 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 BCL3P20749 454 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 NTSP30990 170 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ARL16Q0P5N6 197 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 OR2F1Q13607 317 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 PTGR1Q14914 329 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ACSBG2Q5FVE4 666 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 RPL13AP3Q6NVV1 102 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 FAM231DQ6ZW35 169 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 GVQW1Q8N7I0 195 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 KLHDC9Q8NEP7 349 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 CD200R1Q8TD46 325 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 TRUB1Q8WWH5 349 aaKnown RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 TMEM9BQ9NQ34 198 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 MYH10P35580 1976 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 A0A1W2PPI3 338 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 NPIPB9F8W1W9 429 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 IFNA2P01563 188 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 CDKN2DP55273 166 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 RPS13P62277 151 aaKnown RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 CDKL1Q00532 357 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 MS4A2Q01362 244 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ST3GAL4Q11206 333 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 NSUN5P1Q3KNT7 163 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 TTLL9Q3SXZ7 439 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF260Q3ZCT1 412 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 FAM106AQ4KMX7 169 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 SPATA31B1PQ5VZV4 182 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 SSC4DQ8WTU2 575 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ADARB2Q9NS39 739 aaKnown RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 RIMS3Q9UJD0 308 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 TMCO1Q9UM00 188 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 SOGA1O94964 1423 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 GON4LQ3T8J9 2241 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 KIAA0232Q92628 1395 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 TSTD3H0UI37 97 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 BET1O15155 118 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 FAM189A1O60320 539 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 HTR1AP08908 422 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 GABRA1P14867 456 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 CXCL3P19876 107 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 MAKP20794 623 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 YAP1P46937 504 aaKnown RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF774Q6NX45 483 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ALKAL1Q6UXT8 129 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 FAM19A5Q7Z5A7 132 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 APLFQ8IW19 511 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-204ENST00000504430 PYROXD1Q8WU10 500 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ASB17Q8WXJ9 295 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 LINC00476Q8WZB0 136 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms