RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SPATC1Q76KD6 591 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 SLC16A9Q7RTY1 509 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 BCL6BQ8N143 479 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 PLPP7Q8NBV4 271 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 BBS1Q8NFJ9 593 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 TEX47Q8TBZ9 253 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF418Q8TF45 676 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 NR1H4Q96RI1 486 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 INTS14Q96SY0 518 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 CIB1Q99828 191 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 ADAT1Q9BUB4 502 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 SSBP3Q9BWW4 388 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 SLC22A4Q9H015 551 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 SLC25A19Q9HC21 320 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF69Q9UC07 566 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 MIOXQ9UGB7 285 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 OAZ3Q9UMX2 235 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 KLHDC2Q9Y2U9 406 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 PPIAL4AQ9Y536 164 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 TRRAPQ9Y4A5 3859 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 TMEM89A2RUT3 159 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 C22orf46C9J442 243 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 XRCC2O43543 280 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 PLATP00750 562 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 RPS2P15880 293 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 GSTT1P30711 240 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 CX3CR1P49238 355 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 SCGB2A2Q13296 93 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 MED21Q13503 144 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 OR8G1Q15617 311 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 ESCO2Q56NI9 601 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 FAHD1Q6P587 224 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 DCDC5Q6ZRR9 648 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 ZDHHC13Q8IUH4 622 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 ERI1Q8IV48 349 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 GALNT4Q8N4A0 578 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 CBR4Q8N4T8 237 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 GCSAMQ8N6F7 178 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 OR6N2Q8NGY6 317 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 OTOSQ8NHW6 89 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 SPRYD4Q8WW59 207 aaPredicted RBP11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 C22orf15Q8WYQ4 148 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 UPRTQ96BW1 309 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 ZMYND19Q96E35 227 aaPredicted RBP11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 NEIL1Q96FI4 390 aaPredicted RBP11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 RDH12Q96NR8 316 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 FGF23Q9GZV9 251 aaPredicted RBP11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 TOR3AQ9H497 397 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 OPA3Q9H6K4 179 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 CENPMQ9NSP4 180 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 UFSP2Q9NUQ7 469 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 SOX21Q9Y651 276 aaPredicted RBP11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 AUP1Q9Y679 476 aa11.65□□□□□ -0.54
PDLIM7-211ENST00000504318 KIR2DS1A0A191URI9 304 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 CCDC182A6NF36 153 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 PRR32B1ATL7 298 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 H3BN98 237 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 DENRO43583 198 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 SELENOFO60613 162 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 E2F6O75461 281 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 IGHV4-38-2P0DP08 117 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 EGR1P18146 543 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 ZNF121P58317 390 aaPredicted RBP11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 UBA52P62987 128 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 OR8B8Q15620 311 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 TMEM236Q5W0B7 351 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 PLBD1Q6P4A8 553 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 ZNF826PQ6ZT77 177 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 C9orf139Q6ZV77 190 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 DOK3Q7L591 496 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 KRT74Q7RTS7 529 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 CPOQ8IVL8 374 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 C1orf87Q8N0U7 546 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 RAB40AQ8WXH6 277 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 NRBF2Q96F24 287 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 LYZL4Q96KX0 146 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 SUCNR1Q9BXA5 334 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 TLNRD1Q9H1K6 362 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 SMURF1Q9HCE7 757 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 RNF7Q9UBF6 113 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 NUP50Q9UKX7 468 aa11.64□□□□□ -0.55
PDLIM7-211ENST00000504318 GGT3PA6NGU5 568 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 LRRC30A6NM36 301 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 G3V2T6 193 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 LGALS8O00214 317 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 PHYHO14832 338 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 PRODHO43272 600 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 ANXA8P13928 327 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 ACKR3P25106 362 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 CFPP27918 469 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 PITPNBP48739 271 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 DAPP51397 102 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 ALDH3A2P51648 485 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 EFNB1P98172 346 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 TEX36Q5VZQ5 186 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 SHFQ7M4L6 423 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 SIGLECL1Q8N7X8 197 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 OR5K1Q8NHB7 308 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms