RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 HIST1H3AP68431 136 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 GK2Q14410 553 aaPredicted RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 SSPNQ14714 243 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 PNLIPRP3Q17RR3 467 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 HIST2H3PS2Q5TEC6 136 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 ZNF468Q5VIY5 522 aaPredicted RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 OR52W1Q6IF63 320 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 FAHD2BQ6P2I3 314 aaPredicted RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 C6orf15Q6UXA7 325 aaPredicted RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 HIST2H3AQ71DI3 136 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 TMUB2Q71RG4 321 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 NAA40Q86UY6 237 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 SLC25A42Q86VD7 318 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 C20orf196Q8IYI0 205 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 BEST3Q8N1M1 668 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 DEFB123Q8N688 67 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 OR14L1PQ8NHC6 308 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 PP6455Q8WZ26 134 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 MARVELD3Q96A59 401 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 C10orf35Q96D05 121 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 FAHD2AQ96GK7 314 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 ZPBPQ9BS86 351 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 ARL6Q9H0F7 186 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 PLEK2Q9NYT0 353 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 KIF25Q9UIL4 384 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 VSIG4Q9Y279 399 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 KCNK7Q9Y2U2 307 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 LOXL2Q9Y4K0 774 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 NCOA6Q14686 2063 aaPredicted RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 M0R135 149 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 PRF1P14222 555 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 RPA2P15927 270 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 HIST1H1DP16402 221 aaKnown RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 OTX1P32242 354 aaPredicted RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 CD96P40200 585 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 MRPS34P82930 218 aaKnown RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 ACTBL2Q562R1 376 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 FAM27BQ5VT28 67 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 B3GNTL1Q67FW5 361 aaPredicted RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 PPP1R32Q7Z5V6 425 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 LYG2Q86SG7 212 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 CCDC28AQ8IWP9 274 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 TMEM104Q8NE00 496 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 OR5M8Q8NGP6 311 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 OR4K15Q8NH41 348 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 RHBDD1Q8TEB9 315 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 SSC4DQ8WTU2 575 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 ZNF799Q96GE5 643 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 C1orf147Q96MC9 270 aaPredicted RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 S100A13Q99584 98 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 SRXN1Q9BYN0 137 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 STRADBQ9C0K7 418 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 V9GYS6 101 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 WDFY3Q8IZQ1 3526 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 LOC100509620A0A075B734 347 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 IGKV1-9A0A0C4DH69 117 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 OR5H15A6NDH6 313 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 MASP2O00187 686 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 SMAD9O15198 467 aaKnown RBP9.73□□□□□ -0.85
CMSS1-208ENST00000496116 ZNF883P0CG24 379 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 CBX5P45973 191 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 CARD18P57730 90 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 RPS18P62269 152 aaKnown RBP9.73□□□□□ -0.85
CMSS1-208ENST00000496116 IL13RA1P78552 427 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 SORDQ00796 357 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 HLXQ14774 488 aaPredicted RBP9.73□□□□□ -0.85
CMSS1-208ENST00000496116 KISS1Q15726 138 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 ZNF528Q3MIS6 628 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 SLC22A6Q4U2R8 563 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 NHLRC3Q5JS37 347 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 C17orf107Q6ZR85 190 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 COMMD7Q86VX2 200 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 ZIC4Q8N9L1 334 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 OR52H1Q8NGJ2 320 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 LYZL4Q96KX0 146 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 PHB2Q99623 299 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 PDCD10Q9BUL8 212 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 CHST5Q9GZS9 411 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 MFFQ9GZY8 342 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 OR10A2Q9H208 303 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 BANF2Q9H503 90 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 COMMD9Q9P000 198 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 FBXO4Q9UKT5 387 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 FLVCR1Q9Y5Y0 555 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 A0A0A6YYD4 124 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 SOCS1O15524 211 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 SSX5O60225 188 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 CD8AP01732 235 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 ANOS1P23352 680 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 ZBTB25P24278 435 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 PTGFRP43088 359 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 ALDH3B1P43353 468 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 B3GALT5-AS1P59052 145 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 LPAL2Q16609 132 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 PLAC9Q5JTB6 97 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 TOR2AQ5JU69 321 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 LY6G6FQ5SQ64 297 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 GSG1LQ6UXU4 331 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 RNF144BQ7Z419 303 aa9.73□□□□□ -0.85
CMSS1-208ENST00000496116 YRDCQ86U90 279 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms