RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 UBCP0CG48 685 aaKnown RBP14.57□□□□□ -0.08
HDAC6-235ENST00000495515 CCR9P51686 369 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 PRSS12P56730 875 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 TSTQ16762 297 aaKnown RBP14.57□□□□□ -0.08
HDAC6-235ENST00000495515 Q5PR19 223 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 RNLSQ5VYX0 342 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 DOK3Q7L591 496 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 KLBQ86Z14 1044 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 OR2Z1Q8NG97 314 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 ELMOD3Q96FG2 381 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 ISG20L2Q9H9L3 353 aaKnown RBP14.57□□□□□ -0.08
HDAC6-235ENST00000495515 SLC22A13Q9Y226 551 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 LRBAP50851 2863 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 USF3Q68DE3 2245 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-235ENST00000495515 LOC390937A0A1W2PQ73 354 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 GMDSO60547 372 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 DHRS3O75911 302 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 IGLV3-1P01715 115 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 CD55P08174 381 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 ZNF12P17014 697 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 TNFRSF1AP19438 455 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 CRHBPP24387 322 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 C21orf33P30042 268 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-235ENST00000495515 GNALP38405 381 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 TGM4P49221 684 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 DSCR9P59020 149 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 SLC35A2P78381 396 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 CCL8P80075 99 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 TNFAIP6P98066 277 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-235ENST00000495515 MZT1Q08AG7 82 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 RIPPLY1Q0D2K3 151 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 ALKBH1Q13686 389 aaKnown RBP14.56□□□□□ -0.08
HDAC6-235ENST00000495515 CCDC58Q4VC31 144 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 WDR38Q5JTN6 314 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 TMEM244Q5VVB8 128 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 Q6ZR03 302 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 SPERTQ8NA61 448 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 SEMA6DQ8NFY4 1073 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 UBASH3BQ8TF42 649 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 GTF3AQ92664 365 aaKnown RBP14.56□□□□□ -0.08
HDAC6-235ENST00000495515 PPP1R14AQ96A00 147 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 FAM71F1Q96KD3 344 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-235ENST00000495515 LYZL4Q96KX0 146 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 DUSP21Q9H596 190 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 SAP30LQ9HAJ7 183 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 ABCB9Q9NP78 766 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 TRIM36Q9NQ86 728 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 BABAM2Q9NXR7 383 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 IL19Q9UHD0 177 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 PCDHGB5Q9Y5G0 923 aa14.56□□□□□ -0.08
HDAC6-235ENST00000495515 P2RY10O00398 339 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 SYT7O43581 403 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 RGS10O43665 173 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 DAOP14920 347 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 CA6P23280 308 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 EEF1B2P24534 225 aaKnown RBP14.55□□□□□ -0.08
HDAC6-235ENST00000495515 MAGEB1P43366 347 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 SRP9P49458 86 aaKnown RBP14.55□□□□□ -0.08
HDAC6-235ENST00000495515 MRPS11P82912 194 aaKnown RBP14.55□□□□□ -0.08
HDAC6-235ENST00000495515 MVKQ03426 396 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 TESK1Q15569 626 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 OR8G1Q15617 311 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 ZBTB37Q5TC79 503 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 OR2G6Q5TZ20 316 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 CLEC2AQ6UVW9 174 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 PRSS35Q8N3Z0 413 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 ZNF676Q8N7Q3 588 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 RDH5Q92781 318 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 PAPOLGQ9BWT3 736 aaKnown RBP14.55□□□□□ -0.08
HDAC6-235ENST00000495515 CDCA4Q9BXL8 241 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 YTHDF1Q9BYJ9 559 aaKnown RBP14.55□□□□□ -0.08
HDAC6-235ENST00000495515 COMMD4Q9H0A8 199 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 FRRS1LQ9P0K9 344 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 CLEC2DQ9UHP7 191 aa14.55□□□□□ -0.08
HDAC6-235ENST00000495515 CCDC168Q8NDH2 2452 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 ZNF816-ZNF321PA0A0X1KG74 233 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 A0A1B0GWJ7 208 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 TMEM212A6NML5 194 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 ANXA2P2A6NMY6 339 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 DHRS7CA6NNS2 312 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 LILRA1O75019 489 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 CCL1P22362 96 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 PDLIM4P50479 330 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 WNT4P56705 351 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 TAS2R43P59537 309 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 CLEC12BQ2HXU8 276 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 ODF4Q2M2E3 257 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 RPL22L1Q6P5R6 122 aaKnown RBP14.54□□□□□ -0.08
HDAC6-235ENST00000495515 PLPP7Q8NBV4 271 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 OR10AD1Q8NGE0 317 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 OR8S1Q8NH09 359 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 ADAT1Q9BUB4 502 aaKnown RBP14.54□□□□□ -0.08
HDAC6-235ENST00000495515 MND1Q9BWT6 205 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 CCDC90BQ9GZT6 254 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 PLEKHA1Q9HB21 404 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 DLL4Q9NR61 685 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 UBAP1Q9NZ09 502 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 ENPP5Q9UJA9 477 aa14.54□□□□□ -0.08
HDAC6-235ENST00000495515 MPC1Q9Y5U8 109 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms