RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 LINC00346Q8IVM7 164 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 ENTHD1Q8IYW4 607 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 BCL6BQ8N143 479 aaPredicted RBP5.73□□□□□ -1.49
VPS52-219ENST00000493379 OR5L1Q8NGL2 311 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 OR1J1Q8NGS3 322 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 OR2T27Q8NH04 317 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 SYNPRQ8TBG9 265 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 NEU4Q8WWR8 484 aaPredicted RBP5.73□□□□□ -1.49
VPS52-219ENST00000493379 SLC7A6Q92536 515 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 TFAP2CQ92754 450 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 RFKQ969G6 155 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 SLAMF6Q96DU3 332 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 ZMYND19Q96E35 227 aaPredicted RBP5.73□□□□□ -1.49
VPS52-219ENST00000493379 IL4I1Q96RQ9 567 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 AMELYQ99218 206 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 ZNF649Q9BS31 505 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 ADI1Q9BV57 179 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 CACNG6Q9BXT2 260 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 OR2J1Q9GZK6 312 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 CNTD2Q9H8S5 307 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 BARX1Q9HBU1 254 aaPredicted RBP5.73□□□□□ -1.49
VPS52-219ENST00000493379 ADGRL4Q9HBW9 690 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 MYOZ1Q9NP98 299 aaPredicted RBP5.73□□□□□ -1.49
VPS52-219ENST00000493379 CLN6Q9NWW5 311 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 SMPD3Q9NY59 655 aaPredicted RBP5.73□□□□□ -1.49
VPS52-219ENST00000493379 NKX1-2Q9UD57 310 aaPredicted RBP5.73□□□□□ -1.49
VPS52-219ENST00000493379 EXOGQ9Y2C4 368 aaKnown RBP5.73□□□□□ -1.49
VPS52-219ENST00000493379 ORC6Q9Y5N6 252 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 RYR1P21817 5038 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 PCLOQ9Y6V0 5065 aa5.73□□□□□ -1.49
VPS52-219ENST00000493379 A0A096LNT2 108 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 C17orf100A8MU93 164 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 VWC2LB2RUY7 222 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 M0R135 149 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 PHYHO14832 338 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 SELENOFO60613 162 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 WBP4O75554 376 aaKnown RBP5.72□□□□□ -1.49
VPS52-219ENST00000493379 SULT1C4O75897 302 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 FSTL3O95633 263 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 CLPTM1O96005 669 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 LYNP07948 512 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 GIFP27352 417 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 PEX2P28328 305 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 RPS27P42677 84 aaKnown RBP5.72□□□□□ -1.49
VPS52-219ENST00000493379 KLF3P57682 345 aaPredicted RBP5.72□□□□□ -1.49
VPS52-219ENST00000493379 DSCR9P59020 149 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 SELENOVP59797 346 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 ERVS71-1P61550 626 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 SNRPD2P62316 118 aaKnown RBP5.72□□□□□ -1.49
VPS52-219ENST00000493379 TRIP10Q15642 601 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 ZIK1Q3SY52 487 aaPredicted RBP5.72□□□□□ -1.49
VPS52-219ENST00000493379 MIDNQ504T8 468 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 KLHL12Q53G59 568 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 LCN1P1Q5VSP4 162 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 ZNF691Q5VV52 312 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 KCTD18Q6PI47 426 aaPredicted RBP5.72□□□□□ -1.49
VPS52-219ENST00000493379 RFPL4BQ6ZWI9 263 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 BCDIN3DQ7Z5W3 292 aaKnown RBP5.72□□□□□ -1.49
VPS52-219ENST00000493379 KCTD20Q7Z5Y7 419 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 ERI1Q8IV48 349 aaKnown RBP5.72□□□□□ -1.49
VPS52-219ENST00000493379 ZNF679Q8IYX0 411 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 LINC00482Q8N8I6 264 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 OR52H1Q8NGJ2 320 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 OR6K6Q8NGW6 343 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 SLC25A40Q8TBP6 338 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 SPTSSAQ969W0 71 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 ZNF799Q96GE5 643 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 OR8B4Q96RC9 309 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 DIRC2Q96SL1 478 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 RIBC2Q9H4K1 309 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 SP140LQ9H930 580 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 CYSLTR2Q9NS75 346 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 MYEF2Q9P2K5 600 aaKnown RBP5.72□□□□□ -1.49
VPS52-219ENST00000493379 ZNF391Q9UJN7 358 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 ZDHHC8Q9ULC8 765 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS52-219ENST00000493379 COPS3Q9UNS2 423 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 POLR1DQ9Y2S0 133 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 GRIP1Q9Y3R0 1128 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 GMPPBQ9Y5P6 360 aa5.72□□□□□ -1.49
VPS52-219ENST00000493379 CMYA5Q8N3K9 4069 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 A0A0U1RQV5 110 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 LOC390937A0A1W2PQ73 354 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 IQCF6A8MYZ5 107 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 PRR32B1ATL7 298 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 F5H5K5 113 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 NDUFS8O00217 210 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 TMEM127O75204 238 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 NDUFS7O75251 213 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 ENTPD6O75354 484 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 PTBP3O95758 552 aaKnown RBP5.71□□□□□ -1.5
VPS52-219ENST00000493379 LCKP06239 509 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 SPARCP09486 303 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 CSF3P09919 207 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 CCNOP22674 350 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 ANOS1P23352 680 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 CDKN1AP38936 164 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 MPV17P39210 176 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 DDOSTP39656 456 aa5.71□□□□□ -1.5
VPS52-219ENST00000493379 MTNR1AP48039 350 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms