RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 TMEM5Q9Y2B1 443 aa9.54□□□□□ -0.88
CACNA1C-228ENST00000492150 CD33P20138 364 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 EEF1B2P24534 225 aaKnown RBP9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 GGT2P36268 569 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 KIR2DS4P43632 304 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 TPTEP56180 551 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 PCK2Q16822 640 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 SNAI3Q3KNW1 292 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 NKAPLQ5M9Q1 402 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 METTL21CQ5VZV1 264 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 DNM1P34Q6PK57 102 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 RRM2BQ7LG56 351 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 SPERTQ8NA61 448 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 PAPD5Q8NDF8 572 aaKnown RBP9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 DYDC1Q8WWB3 177 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 TNFRSF14Q92956 283 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 DMRTB1Q96MA1 342 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 ANKRD19PQ9H560 264 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 MRPL15Q9P015 296 aaKnown RBP9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 AURKCQ9UQB9 309 aa9.53□□□□□ -0.88
CACNA1C-228ENST00000492150 A0A0G2JND7 137 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 hCG_1807616A0A1W2PRN6 198 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 GGT3PA6NGU5 568 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 A6NLC8 198 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 M0R135 149 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 DUS4LO95620 317 aaKnown RBP9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 ZNF682O95780 498 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 AMY2BP19961 511 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 LMO1P25800 156 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 SAA4P35542 130 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 OMPP47874 163 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 RPS6KA3P51812 740 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 RFX4Q33E94 735 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 SLC36A3Q495N2 470 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 IFI44LQ53G44 452 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 WDR38Q5JTN6 314 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 GLYATL3Q5SZD4 288 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 CBLL1Q75N03 491 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 WDR86Q86TI4 376 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 ZBTB46Q86UZ6 589 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 CMTM4Q8IZR5 234 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 KLHDC1Q8N7A1 406 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 FAM216BQ8N7L0 139 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 OR2AJ1Q8NGZ0 328 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 R3HDM4Q96D70 268 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 SEH1LQ96EE3 360 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 ZNF799Q96GE5 643 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 NMNAT3Q96T66 252 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 DCTN5Q9BTE1 182 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 MRPL22Q9NWU5 206 aaKnown RBP9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 CMTM6Q9NX76 183 aa9.52□□□□□ -0.89
CACNA1C-228ENST00000492150 A0A1W2PRQ8 180 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 MEIOCA2RUB1 952 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 MEGF11A6BM72 1044 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 UNC119BA6NIH7 251 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 H3BUX3 64 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 ACOT8O14734 319 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 PAHP00439 452 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 MUC1P15941 1255 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 OTX1P32242 354 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 TGM4P49221 684 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 UBE2E1P51965 193 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 KLF10Q13118 480 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 DGCR6Q14129 220 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 SEC23BQ15437 767 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 MICBQ29980 383 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 CRIP3Q6Q6R5 217 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 SMARCD3Q6STE5 483 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 NDUFA11Q86Y39 141 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 LYG1Q8N1E2 194 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 BEND2Q8NDZ0 799 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 OR56B2PQ8NGI1 322 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 C8orf46Q8TAG6 207 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 LRRC29Q8WV35 223 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 C17orf50Q8WW18 174 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 RCC1LQ96I51 464 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 AJUBAQ96IF1 538 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 HSH2DQ96JZ2 352 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 ERMAPQ96PL5 475 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 TMEM120AQ9BXJ8 343 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 RNPEPL1Q9HAU8 725 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 RPRD1BQ9NQG5 326 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 C14orf119Q9NWQ9 140 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 PRPF19Q9UMS4 504 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 ENPP4Q9Y6X5 453 aa9.51□□□□□ -0.89
CACNA1C-228ENST00000492150 HECTD4Q9Y4D8 3996 aa9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 HUWE1Q7Z6Z7 4374 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 TRBV4-1A0A0J9YWV2 114 aa9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 OR6C68A6NDL8 312 aa9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 BBIP1A8MTZ0 92 aa9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 CXCR6O00574 342 aa9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 BHLHE40O14503 412 aa9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 NDUFB3O43676 98 aa9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 EDF1O60869 148 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 RENP00797 406 aa9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 H1F0P07305 194 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-228ENST00000492150 SELLP14151 372 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms