RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ADAT1Q9BUB4 502 aaKnown RBP6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 ABHD6Q9BV23 337 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 SIRPDQ9H106 197 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 SMURF1Q9HCE7 757 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 UFSP2Q9NUQ7 469 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 TBC1D23Q9NUY8 699 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 TAS2R1Q9NYW7 299 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 PRPF19Q9UMS4 504 aaKnown RBP6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 SAMHD1Q9Y3Z3 626 aaKnown RBP6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 PCDHGB1Q9Y5G3 927 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 TRAV40A0A0B4J280 105 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 OOEPA6NGQ2 149 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 RIIAD1A6NNX1 92 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 GLCEO94923 617 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 ECDO95905 644 aaPredicted RBP6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 IFNGP01579 166 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 APOC1P02654 83 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 SPARCP09486 303 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 RAP2AP10114 183 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 MUC1P15941 1255 aaPredicted RBP6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 HOXB6P17509 224 aaKnown RBP6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 AMY2BP19961 511 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 CALB2P22676 271 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 CFL1P23528 166 aaKnown RBP6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 GRK5P34947 590 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 TGM4P49221 684 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 PRKXP51817 358 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 DEFB112Q30KQ8 113 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 FAM98BQ52LJ0 330 aaKnown RBP6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 SFRP4Q6FHJ7 346 aaPredicted RBP6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 ZNF826PQ6ZT77 177 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 DPY19L4Q7Z388 723 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 TMEM179BQ7Z7N9 219 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 ADGRG5Q8IZF4 528 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 GALNT4Q8N4A0 578 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 C19orf18Q8NEA5 215 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 OR1M1Q8NGA1 313 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 OR10G2Q8NGC3 310 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 ITFG2Q969R8 447 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 C12orf43Q96C57 262 aaKnown RBP6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 WDFY2Q96P53 400 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 DUX5Q96PT3 197 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 CHID1Q9BWS9 393 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 RGCCQ9H4X1 137 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 REEP1Q9H902 201 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 SP140LQ9H930 580 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 UNKLQ9H9P5 680 aaKnown RBP6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 CENPMQ9NSP4 180 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 ARMC1Q9NVT9 282 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 C14orf119Q9NWQ9 140 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 C1orf123Q9NWV4 160 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 ERVK-18Q9QC07 812 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 POMT1Q9Y6A1 747 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 U3KQV3 271 aa6.93□□□□□ -1.3
SMARCB1-207ENST00000491967 NOTCH1P46531 2555 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 IGHV3OR16-10A0A075B7F0 116 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 CENPVL3A0A0U1RRI6 287 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 MDFIC2A0A1B0GVS7 189 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 AQP12BA6NM10 295 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 ANKRD30BLA7E2S9 258 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 C3orf80F5H4A9 247 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 DVL1O14640 695 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 ADAM20O43506 726 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 TIPRLO75663 272 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 NDUFA7O95182 113 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 SOX14O95416 240 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 FAM107AO95990 144 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 CST4P01036 141 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 SFTPBP07988 381 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 SLC2A1P11166 492 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 ZNF3P17036 446 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 GSTT1P30711 240 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 DCTDP32321 178 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 CX3CR1P49238 355 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 GSK3AP49840 483 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 ZNF121P58317 390 aaPredicted RBP6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 RPL15P61313 204 aaKnown RBP6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 CDK5Q00535 292 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 RELBQ01201 579 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 METAP1DQ6UB28 335 aaPredicted RBP6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 WDR82Q6UXN9 313 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 BRD3OSQ6XYD6 125 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 SHFQ7M4L6 423 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 AQP12AQ8IXF9 295 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 ZNF454Q8N9F8 522 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 PNLDC1Q8NA58 520 aaKnown RBP6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 CSNK2A3Q8NEV1 391 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 OTOSQ8NHW6 89 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 C8orf46Q8TAG6 207 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 GIPC3Q8TF64 312 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 CANT1Q8WVQ1 401 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 TMIGD2Q96BF3 282 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 ITPKCQ96DU7 683 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 REEP6Q96HR9 211 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 FAM71F1Q96KD3 344 aaPredicted RBP6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 INTS14Q96SY0 518 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 PPP1R3EQ9H7J1 279 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 VWFP04275 2813 aa6.92□□□□□ -1.3
SMARCB1-207ENST00000491967 IGHV1-69DA0A0B4J2H0 117 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms