RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 OR52N4Q8NGI2 321 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 MRGPRX4Q96LA9 322 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 NUDT9Q9BW91 350 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 POMT2Q9UKY4 750 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 SHROOM3Q8TF72 1996 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 A0A087WUJ7 227 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 OR7C2O60412 319 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 DTYMKP23919 212 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 SUB1P53999 127 aaKnown RBP eCLIP15.86■□□□□ 0.13
NPHP4-209ENST00000489180 SPATA46Q5T0L3 261 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 FAM173AQ9BQD7 235 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 ZNF230Q9UIE0 474 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-209ENST00000489180 ARPC3O15145 178 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 YIF1AO95070 293 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 METTL15P1P0C7V9 234 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 TBPP20226 339 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 RPS16P62249 146 aaKnown RBP15.86■□□□□ 0.13
NPHP4-209ENST00000489180 SP6Q3SY56 376 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 ANKRD33Q7Z3H0 272 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 GPR32P1Q8NGA4 272 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 OR10X1Q8NGY0 326 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 PRDM7Q9NQW5 492 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 TOGARAM1Q9Y4F4 1720 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 A0A1W2PPQ1 181 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 CST7O76096 145 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 ACSM4P0C7M7 580 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 ACOT6Q3I5F7 207 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-209ENST00000489180 ZNF528Q3MIS6 628 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 CISD2Q8N5K1 135 aaKnown RBP15.86■□□□□ 0.13
NPHP4-209ENST00000489180 OTOSQ8NHW6 89 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 ALS2Q96Q42 1657 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 M0R1B8 84 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 SLC17A2O00624 439 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 RRASP10301 218 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 MENTQ9BUN1 341 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 TRAPPC4Q9Y296 219 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 NRAPQ86VF7 1730 aa15.86■□□□□ 0.13
NPHP4-209ENST00000489180 LINC01565O15544 149 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 ONECUT2O95948 504 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 FZD2Q14332 565 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 VASH2Q86V25 355 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 ZNF485Q8NCK3 441 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 IL20Q9NYY1 176 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 G3V3Q6 166 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 CHEK1O14757 476 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 GPM6AP51674 278 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 HTRA4P83105 476 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-209ENST00000489180 CLN3Q13286 438 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 OR2T2Q6IF00 324 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 ETFBKMTQ8IXQ9 262 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 NOXO1Q8NFA2 376 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 FGF14Q92915 247 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 A0A1B0GTH9 108 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 NQO2P16083 231 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 ERGIC1Q969X5 290 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 ALKBH3Q96Q83 286 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-209ENST00000489180 DHRS9Q9BPW9 319 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 SIGLEC7Q9Y286 467 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 ENDOGQ14249 297 aaKnown RBP15.85■□□□□ 0.13
NPHP4-209ENST00000489180 KIAA0040Q15053 153 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-209ENST00000489180 ARL2-SNX15V9GYD0 113 aa15.85■□□□□ 0.13
NPHP4-209ENST00000489180 N4BP2Q86UW6 1770 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-209ENST00000489180 TMEM272A0A1B0GTI8 110 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 SLC25A4P12235 298 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 FMODQ06828 376 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 FABP9Q0Z7S8 132 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 DRAM2Q6UX65 266 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 BOD1Q96IK1 185 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 CCDC74BQ96LY2 380 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 CHST6Q9GZX3 395 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 BTAF1O14981 1849 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 A0A0B4J2E0 115 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 A0A1B0GX12 115 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 DHHO43323 396 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 WDR38Q5JTN6 314 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 NCR3LG1Q68D85 454 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 CLEC9AQ6UXN8 241 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 ZG16BQ96DA0 208 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 OR8B4Q96RC9 309 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 DLL4Q9NR61 685 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 KCNE1BA0A087WTH5 132 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 SOX15O60248 233 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 FGF7P21781 194 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 RAB1AP62820 205 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 PRR27Q6MZM9 219 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 SIGLECL1Q8N7X8 197 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 UBALD1Q8TB05 177 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 CRYM-AS1A6NIL9 109 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 SEC14L6B5MCN3 397 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 CSF2RBP32927 897 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 TMEM128Q5BJH2 165 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 UBE2L5PA0A1B0GUS4 154 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 A0A1W2PPC4 97 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 GPR37O15354 613 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 RPL7L1Q6DKI1 246 aaKnown RBP15.84■□□□□ 0.13
NPHP4-209ENST00000489180 UBE3DQ7Z6J8 389 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 C20orf196Q8IYI0 205 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 TMPRSS13Q9BYE2 586 aa15.84■□□□□ 0.13
NPHP4-209ENST00000489180 A0A1W2PPH5 198 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms