RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CPT2P23786 658 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 EPHA2P29317 976 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 ESRRGP62508 458 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 PAX2Q02962 417 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 GFOD2Q3B7J2 385 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 AMIGO2Q86SJ2 522 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.88■□□□□ 0.93
HMGN1-217ENST00000489072 SPERTQ8NA61 448 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 PLPP7Q8NBV4 271 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 NEIL1Q96FI4 390 aaPredicted RBP20.88■□□□□ 0.93
HMGN1-217ENST00000489072 PGAM5Q96HS1 289 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 OR10A2Q9H208 303 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 PPP1R3EQ9H7J1 279 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 KRT84Q9NSB2 600 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 RNF7Q9UBF6 113 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 OR5V1Q9UGF6 321 aa20.88■□□□□ 0.93
HMGN1-217ENST00000489072 A0A0A6YYJ9 748 aa20.87■□□□□ 0.93
HMGN1-217ENST00000489072 G3V2T6 193 aa20.87■□□□□ 0.93
HMGN1-217ENST00000489072 M0R129 80 aa20.87■□□□□ 0.93
HMGN1-217ENST00000489072 FASP25445 335 aa20.87■□□□□ 0.93
HMGN1-217ENST00000489072 GSK3AP49840 483 aa20.87■□□□□ 0.93
HMGN1-217ENST00000489072 ZNF826PQ6ZT77 177 aa20.87■□□□□ 0.93
HMGN1-217ENST00000489072 LRTOMTQ8WZ04 291 aa20.87■□□□□ 0.93
HMGN1-217ENST00000489072 TEAD3Q99594 435 aa20.87■□□□□ 0.93
HMGN1-217ENST00000489072 GABARAPL1Q9H0R8 117 aa20.87■□□□□ 0.93
HMGN1-217ENST00000489072 C1orf123Q9NWV4 160 aa20.87■□□□□ 0.93
HMGN1-217ENST00000489072 TENM1Q9UKZ4 2725 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.86■□□□□ 0.93
HMGN1-217ENST00000489072 ANKRD30BLA7E2S9 258 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 GRPP07492 148 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 MRPL3P09001 348 aaKnown RBP20.86■□□□□ 0.93
HMGN1-217ENST00000489072 CD80P33681 288 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 GNB2P62879 340 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 KDM4DQ6B0I6 523 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 DCDC5Q6ZRR9 648 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 BCDIN3DQ7Z5W3 292 aaKnown RBP20.86■□□□□ 0.93
HMGN1-217ENST00000489072 WDR86Q86TI4 376 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 BOLLQ8N9W6 283 aaKnown RBP20.86■□□□□ 0.93
HMGN1-217ENST00000489072 ZNF418Q8TF45 676 aaPredicted RBP20.86■□□□□ 0.93
HMGN1-217ENST00000489072 SLC6A7Q99884 636 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 YIPF3Q9GZM5 350 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 LAMP5Q9UJQ1 280 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 LRP12Q9Y561 859 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 AUP1Q9Y679 476 aa20.86■□□□□ 0.93
HMGN1-217ENST00000489072 PRR32B1ATL7 298 aa20.85■□□□□ 0.93
HMGN1-217ENST00000489072 CFL1P23528 166 aaKnown RBP20.85■□□□□ 0.93
HMGN1-217ENST00000489072 PITPNBP48739 271 aa20.85■□□□□ 0.93
HMGN1-217ENST00000489072 PSMA6P60900 246 aaKnown RBP20.85■□□□□ 0.93
HMGN1-217ENST00000489072 SLX4IPQ5VYV7 408 aa20.85■□□□□ 0.93
HMGN1-217ENST00000489072 OR8B3Q8NGG8 313 aa20.85■□□□□ 0.93
HMGN1-217ENST00000489072 DACT3Q96B18 629 aaPredicted RBP20.85■□□□□ 0.93
HMGN1-217ENST00000489072 LYZL4Q96KX0 146 aa20.85■□□□□ 0.93
HMGN1-217ENST00000489072 OR8B2Q96RD0 313 aa20.85■□□□□ 0.93
HMGN1-217ENST00000489072 C14orf119Q9NWQ9 140 aa20.85■□□□□ 0.93
HMGN1-217ENST00000489072 RHBDD3Q9Y3P4 386 aa20.85■□□□□ 0.93
HMGN1-217ENST00000489072 ZAR1LA6NP61 321 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 LGALS8O00214 317 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 EFNB1P98172 346 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 PAX8Q06710 450 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 OR8B8Q15620 311 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 KLF17Q5JT82 389 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-217ENST00000489072 C12orf73Q69YU5 71 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 SFRP4Q6FHJ7 346 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-217ENST00000489072 ZNF841Q6ZN19 808 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 USP43Q70EL4 1123 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 NLRC3Q7RTR2 1065 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 ZDHHC13Q8IUH4 622 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 C11orf53Q8IXP5 236 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 GCSAMQ8N6F7 178 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-217ENST00000489072 OR8B12Q8NGG6 310 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 OR8S1Q8NH09 359 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 C22orf15Q8WYQ4 148 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 RGCCQ9H4X1 137 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 COPS3Q9UNS2 423 aa20.84■□□□□ 0.93
HMGN1-217ENST00000489072 IGHV2-70DA0A0C4DH43 119 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 A6NLC8 198 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 C3orf80F5H4A9 247 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 PSMD9O00233 223 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 ACKR3P25106 362 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 PSMB10P40306 273 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 HILS1P60008 231 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 MZT1Q08AG7 82 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 LCN1P1Q5VSP4 162 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 ASRGL1Q7L266 308 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 KRT77Q7Z794 578 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 TCEANCQ8N8B7 351 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 MRI1Q9BV20 369 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 NIPAL2Q9H841 368 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 CTSZQ9UBR2 303 aa20.83■□□□□ 0.93
HMGN1-217ENST00000489072 TNFRSF13BO14836 293 aaPredicted RBP20.82■□□□□ 0.92
HMGN1-217ENST00000489072 LHBP01229 141 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 FCGR1AP12314 374 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 EGR1P18146 543 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 ARMCX4Q5H9R4 360 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 AADACL4Q5VUY2 407 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 WDR25Q64LD2 544 aaPredicted RBP20.82■□□□□ 0.92
HMGN1-217ENST00000489072 CSNK2A3Q8NEV1 391 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 RAB40AQ8WXH6 277 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 PAPOLGQ9BWT3 736 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms