RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 ZNF454Q8N9F8 522 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 ZMYND19Q96E35 227 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 NRBF2Q96F24 287 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 REEP6Q96HR9 211 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 SLC6A7Q99884 636 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 OR10A2Q9H208 303 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 NTN4Q9HB63 628 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 S100A14Q9HCY8 104 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 UFSP2Q9NUQ7 469 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 CLN8Q9UBY8 286 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 TIPRLO75663 272 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 RGS9O75916 674 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 BAG2O95816 211 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 PPIAL4GP0DN37 164 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 OPRL1P41146 370 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 NPY4RP50391 375 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 ZNF121P58317 390 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 ACTG1P63261 375 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 CDK5Q00535 292 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 KLHL12Q53G59 568 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 LRRN1Q6UXK5 716 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 RBMS3Q6XE24 437 aaKnown RBP11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 SLC16A9Q7RTY1 509 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 HS3ST5Q8IZT8 346 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 OR8S1Q8NH09 359 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 OTOSQ8NHW6 89 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 PRRG3Q9BZD7 231 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 RGCCQ9H4X1 137 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 NIPAL2Q9H841 368 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 SLC25A19Q9HC21 320 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 DNAJC27Q9NZQ0 273 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 NUP50Q9UKX7 468 aa11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 RRP15Q9Y3B9 282 aaKnown RBP11.55□□□□□ -0.56
SPTLC1-207ENST00000488921 FBN3Q75N90 2809 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 IGHV2-70DA0A0C4DH43 119 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 A6NLC8 198 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 NDUFA2O43678 99 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 ANOS1P23352 680 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 RPS7P62081 194 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 FAM3AP98173 230 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 PAX8Q06710 450 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 MPPED2Q15777 294 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 FAM201AQ5SY85 155 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 LCN1P1Q5VSP4 162 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 FAM57BQ71RH2 274 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 CPOQ8IVL8 374 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 CSNK2A3Q8NEV1 391 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 RAB40AQ8WXH6 277 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 DVL3Q92997 716 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 PGAM5Q96HS1 289 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 PAPOLBQ9NRJ5 636 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 ZNF391Q9UJN7 358 aa11.54□□□□□ -0.56
SPTLC1-207ENST00000488921 TRAV38-1A0A0B4J264 116 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 hCG_38984A0A1B0GV85 526 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 hCG_1807616A0A1W2PRN6 198 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 C5orf63A6NC05 138 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 LGALS8O00214 317 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 SELENOFO60613 162 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 PRKACGP22612 351 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 GNALP38405 381 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 PAX2Q02962 417 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 OR8B8Q15620 311 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 ATP6AP1Q15904 470 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 SNAPC1Q16533 368 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 GFOD2Q3B7J2 385 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 C12orf54Q6X4T0 127 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 PRSS45Q7RTY3 260 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 PARP8Q8N3A8 854 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 THEM6Q8WUY1 208 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 AMELYQ99218 206 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 DCLRE1BQ9H816 532 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 ZMAT3Q9HA38 289 aaKnown RBP11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 ABCB9Q9NP78 766 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 C1orf123Q9NWV4 160 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 ERVK-18Q9QC07 812 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 LAMP5Q9UJQ1 280 aa11.53□□□□□ -0.56
SPTLC1-207ENST00000488921 OOEPA6NGQ2 149 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 ANXA2P2A6NMY6 339 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 ENSAO43768 121 aaKnown RBP11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 GRPP07492 148 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 SLC2A5P22732 501 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 PSMB10P40306 273 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 NAA10P41227 235 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 GSK3AP49840 483 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 CRISP1P54107 249 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 PSMA6P60900 246 aaKnown RBP11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 ESRRGP62508 458 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 APOFQ13790 326 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 CD276Q5ZPR3 534 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 WDR25Q64LD2 544 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 FAHD1Q6P587 224 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 KCTD18Q6PI47 426 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 BOLLQ8N9W6 283 aaKnown RBP11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 OR5K1Q8NHB7 308 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 C22orf15Q8WYQ4 148 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 LRTOMTQ8WZ04 291 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 SGK3Q96BR1 496 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 CENPNQ96H22 339 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms