RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-210	ENST00000485247	CHRNG	P07510	517 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	SNRNP70	P08621	437 aa	Known RBP	4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	CST2	P09228	141 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	RHCE	P18577	417 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	CD200	P41217	278 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	CDKN2C	P42773	168 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	ZNF133	P52736	654 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	CDH12	P55289	794 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	CD47	Q08722	323 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	ENDOG	Q14249	297 aa	Known RBP	4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	CASP8	Q14790	479 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	SPANXN4	Q5MJ08	99 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	FAM91A1	Q658Y4	838 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	FBXW12	Q6X9E4	464 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	TIFAB	Q6ZNK6	161 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	ZNF788	Q6ZQV5	615 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	ZNF621	Q6ZSS3	439 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	ZNF826P	Q6ZT77	177 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	C18orf65	Q6ZTR6	163 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	DYNAP	Q8N1N2	210 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	TRIML2	Q8N7C3	387 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	FAM216B	Q8N7L0	139 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	CCDC63	Q8NA47	563 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	OR5L1	Q8NGL2	311 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	SLC38A5	Q8WUX1	472 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	COG8	Q96MW5	612 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	DUX3	Q96PT4	197 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	PANX1	Q96RD7	426 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	P2RX4	Q99571	388 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	SEPHS2	Q99611	448 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	KCNK9	Q9NPC2	374 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	ABCB10	Q9NRK6	738 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	CALML5	Q9NZT1	146 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	KAAG1	Q9UBP8	84 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	DCDC2	Q9UHG0	476 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	PRPF19	Q9UMS4	504 aa	Known RBP	4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	IFT52	Q9Y366	437 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247	FRAS1	Q86XX4	4008 aa		4.22	□□□□□ -1.73
PTPN4-210	ENST00000485247		A0A0B4J2E0	115 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247		A0A0G2JPF8	293 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247		A0A1B0GX12	115 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247		A0A1W2PPL8	197 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247		A0A1W2PQ09	198 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247		A0A1W2PRG6	482 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	hCG_1807616	A0A1W2PRN6	198 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247		A6NLC8	198 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	C12orf71	A8MTZ7	269 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	VGLL3	A8MV65	326 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	HNRNPCL2	B2RXH8	293 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	HNRNPCL3	B7ZW38	293 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247		M0R1W7	72 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	KPNA4	O00629	521 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	FMO6P	O60774	539 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	HNRNPCL1	O60812	293 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	HIST1H2AB	P04908	130 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	GRP	P07492	148 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	FGF4	P08620	206 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	HNRNPCL4	P0DMR1	293 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	COX5B	P10606	129 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	UMPS	P11172	480 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	SELL	P14151	372 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	CPA3	P15088	417 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	SERPINB5	P36952	375 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	MYCNOS	P40205	109 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	GUCA1A	P43080	201 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	GSK3B	P49841	420 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	NCALD	P61601	193 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	TXNL4A	P83876	142 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	BLMH	Q13867	455 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	OR1Q1	Q15612	314 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	OR8G1	Q15617	311 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	ZNF74	Q16587	644 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	WDR38	Q5JTN6	314 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	C9orf66	Q5T8R8	295 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	SLC25A47	Q6Q0C1	308 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	HIST3H2A	Q7L7L0	130 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	LHFPL4	Q7Z7J7	247 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	AMIGO2	Q86SJ2	522 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	GCSAM	Q8N6F7	178 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	OR52H1	Q8NGJ2	320 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	RPS4Y2	Q8TD47	263 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	HDAC2	Q92769	488 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	HIST1H2AC	Q93077	130 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	SLC35B4	Q969S0	331 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	RASD2	Q96D21	266 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	NMD3	Q96D46	503 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	DUS3L	Q96G46	650 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	TMEM19	Q96HH6	336 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	TM2D3	Q9BRN9	247 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	TMEM43	Q9BTV4	400 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	FUT8	Q9BYC5	575 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	RAB17	Q9H0T7	212 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	SMURF2	Q9HAU4	748 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	TMEM27	Q9HBJ8	222 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	PNPO	Q9NVS9	261 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	C1orf123	Q9NWV4	160 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	PITPNC1	Q9UKF7	332 aa		4.21	□□□□□ -1.74
PTPN4-210	ENST00000485247	ANGPT4	Q9Y264	503 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms