RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 CMC2Q9NRP2 79 aa17.89■□□□□ 0.45
USP40-215ENST00000484528 TRAV38-1A0A0B4J264 116 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 ANKRD30BLA7E2S9 258 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 CFHR2P36980 270 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 SLC15A1P46059 708 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 GRB2P62993 217 aaKnown RBP17.88■□□□□ 0.45
USP40-215ENST00000484528 FAM57BQ71RH2 274 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 WDR86Q86TI4 376 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 ARHGAP24Q8N264 748 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 SPERTQ8NA61 448 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 PLPP7Q8NBV4 271 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 SPSB4Q96A44 273 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 REEP6Q96HR9 211 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 CLPTM1LQ96KA5 538 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 TBX15Q96SF7 602 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 INTS14Q96SY0 518 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 ABHD6Q9BV23 337 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 PPP1R3EQ9H7J1 279 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 MARCH7Q9H992 704 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 BRD7Q9NPI1 651 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 C14orf119Q9NWQ9 140 aa17.88■□□□□ 0.45
USP40-215ENST00000484528 ZNF879B4DU55 563 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 H3BN98 237 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 TNFRSF13BO14836 293 aaPredicted RBP17.87■□□□□ 0.45
USP40-215ENST00000484528 WIPF1O43516 503 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 FCN3O75636 299 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 TOX4O94842 621 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 MDKP21741 143 aaPredicted RBP17.87■□□□□ 0.45
USP40-215ENST00000484528 CSNK2BP67870 215 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 ELF3P78545 371 aaPredicted RBP17.87■□□□□ 0.45
USP40-215ENST00000484528 IL13RA1P78552 427 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 FAM3AP98173 230 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 CD276Q5ZPR3 534 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 FGFRL1Q8N441 504 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 SGK3Q96BR1 496 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 CCT8L2Q96SF2 557 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 FEVQ99581 238 aa17.87■□□□□ 0.45
USP40-215ENST00000484528 A0A1B0GW55 424 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 DUX4L2P0CJ85 424 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 DUX4L3P0CJ86 424 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 DUX4L4P0CJ87 422 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 DUX4L5P0CJ88 424 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 DUX4L6P0CJ89 424 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 DUX4L7P0CJ90 424 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 MMP9P14780 707 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 GSTT1P30711 240 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 GRK5P34947 590 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 BLVRAP53004 296 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 ZNF121P58317 390 aaPredicted RBP17.86■□□□□ 0.45
USP40-215ENST00000484528 C16orf87Q6PH81 154 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 DUX4L9Q6RFH8 374 aaPredicted RBP17.86■□□□□ 0.45
USP40-215ENST00000484528 GIPC3Q8TF64 312 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 LRRC29Q8WV35 223 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 RNF133Q8WVZ7 376 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 OR51V1Q9H2C8 321 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 TRIM36Q9NQ86 728 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 ZNF319Q9P2F9 582 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 DUX4Q9UBX2 424 aa17.86■□□□□ 0.45
USP40-215ENST00000484528 hCG_38984A0A1B0GV85 526 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 DVL1O14640 695 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 RAP2AP10114 183 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 POU1F1P28069 291 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 DDOSTP39656 456 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 MZT1Q08AG7 82 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 KLHL12Q53G59 568 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 PRR31Q5SQ13 230 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 PRSS45Q7RTY3 260 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 C11orf53Q8IXP5 236 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 ST8SIA4Q92187 359 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 TMIGD2Q96BF3 282 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 SEH1LQ96EE3 360 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 LRGUKQ96M69 825 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 WDFY2Q96P53 400 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 TOR3AQ9H497 397 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 TAS2R1Q9NYW7 299 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 KIF17Q9P2E2 1029 aa17.85■□□□□ 0.45
USP40-215ENST00000484528 CENPVL3A0A0U1RRI6 287 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 FAM181BA6NEQ2 426 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 SRRM5B3KS81 715 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 P2RY10O00398 339 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 NDUFA2O43678 99 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 GLCEO94923 617 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 CST1P01037 141 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 LHBP01229 141 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 T-ENOLP0DO92 83 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 GSK3AP49840 483 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 ARF6P62330 175 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 METTL11BQ5VVY1 283 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 CD300LDQ6UXZ3 194 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 BTN2A1Q7KYR7 527 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 TMEM179BQ7Z7N9 219 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 PNLDC1Q8NA58 520 aaKnown RBP17.84■□□□□ 0.45
USP40-215ENST00000484528 ASB9Q96DX5 294 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 PGAM5Q96HS1 289 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 PAPOLGQ9BWT3 736 aaKnown RBP17.84■□□□□ 0.45
USP40-215ENST00000484528 SIRPDQ9H106 197 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 RHBDD3Q9Y3P4 386 aa17.84■□□□□ 0.45
USP40-215ENST00000484528 SELENOFO60613 162 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 LIPFP07098 398 aa17.83■□□□□ 0.44
USP40-215ENST00000484528 H2BFMP0C1H6 154 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms