RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 PRDM13Q9H4Q3 707 aa16.52■□□□□ 0.24
HPS4-213ENST00000483631 RNPEPL1Q9HAU8 725 aa16.52■□□□□ 0.24
HPS4-213ENST00000483631 LHBP01229 141 aa16.51■□□□□ 0.23
HPS4-213ENST00000483631 ANXA2P07355 339 aaKnown RBP16.51■□□□□ 0.23
HPS4-213ENST00000483631 OPRL1P41146 370 aa16.51■□□□□ 0.23
HPS4-213ENST00000483631 TIGD6Q17RP2 521 aa16.51■□□□□ 0.23
HPS4-213ENST00000483631 ERI1Q8IV48 349 aaKnown RBP16.51■□□□□ 0.23
HPS4-213ENST00000483631 FTMTQ8N4E7 242 aa16.51■□□□□ 0.23
HPS4-213ENST00000483631 ZNF454Q8N9F8 522 aa16.51■□□□□ 0.23
HPS4-213ENST00000483631 CSNK2A3Q8NEV1 391 aa16.51■□□□□ 0.23
HPS4-213ENST00000483631 SGK3Q96BR1 496 aa16.51■□□□□ 0.23
HPS4-213ENST00000483631 REEP6Q96HR9 211 aa16.51■□□□□ 0.23
HPS4-213ENST00000483631 C1orf123Q9NWV4 160 aa16.51■□□□□ 0.23
HPS4-213ENST00000483631 KAAG1Q9UBP8 84 aa16.51■□□□□ 0.23
HPS4-213ENST00000483631 TRAV40A0A0B4J280 105 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 hCG_38984A0A1B0GV85 526 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 C22orf46C9J442 243 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 PRODHO43272 600 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 TBX1O43435 398 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 HMGN1P05114 100 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 OR8B8Q15620 311 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 TEX36Q5VZQ5 186 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 GCSAMQ8N6F7 178 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 OR8S1Q8NH09 359 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 CANT1Q8WVQ1 401 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 ITFG2Q969R8 447 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 THTPAQ9BU02 230 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 ZNF747Q9BV97 191 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 OR10A2Q9H208 303 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 MMADHCQ9H3L0 296 aaPredicted RBP16.5■□□□□ 0.23
HPS4-213ENST00000483631 YY1AP1Q9H869 796 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 CTSZQ9UBR2 303 aa16.5■□□□□ 0.23
HPS4-213ENST00000483631 MGAM2Q2M2H8 2515 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 FAM183AA6NL82 134 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 A6NLC8 198 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 PRR23D1E9PI22 279 aaPredicted RBP16.49■□□□□ 0.23
HPS4-213ENST00000483631 P2RY10O00398 339 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 GNGT2O14610 69 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 ECDO95905 644 aaPredicted RBP16.49■□□□□ 0.23
HPS4-213ENST00000483631 PRR23D2P0DMB1 279 aaPredicted RBP16.49■□□□□ 0.23
HPS4-213ENST00000483631 CFHR2P36980 270 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 ZNF121P58317 390 aaPredicted RBP16.49■□□□□ 0.23
HPS4-213ENST00000483631 SLC35D3Q5M8T2 416 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 GPR157Q5UAW9 335 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 SFRP4Q6FHJ7 346 aaPredicted RBP16.49■□□□□ 0.23
HPS4-213ENST00000483631 IQCF1Q8N6M8 205 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 PNLDC1Q8NA58 520 aaKnown RBP16.49■□□□□ 0.23
HPS4-213ENST00000483631 C19orf18Q8NEA5 215 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 OTOSQ8NHW6 89 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 CLPTM1LQ96KA5 538 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 DMRTB1Q96MA1 342 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 TECTBQ96PL2 329 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 NIPAL2Q9H841 368 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 MED20Q9H944 212 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 ZNF556Q9HAH1 456 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 ABCB9Q9NP78 766 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 PDP1Q9P0J1 537 aaPredicted RBP16.49■□□□□ 0.23
HPS4-213ENST00000483631 KIF17Q9P2E2 1029 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 ZNF391Q9UJN7 358 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 N6AMT1Q9Y5N5 214 aa16.49■□□□□ 0.23
HPS4-213ENST00000483631 ZNF879B4DU55 563 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 C3orf80F5H4A9 247 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 ADAM20O43506 726 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 GRPP07492 148 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 LYNP07948 512 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 H2BFMP0C1H6 154 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 OSMP13725 252 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 ANXA8P13928 327 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 MUC1P15941 1255 aaPredicted RBP16.48■□□□□ 0.23
HPS4-213ENST00000483631 FGF12P61328 243 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 CDK5Q00535 292 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 GINS1Q14691 196 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 SLC9A3R2Q15599 337 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 DNAL1Q4LDG9 190 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 SHISA2Q6UWI4 295 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 SPATC1Q76KD6 591 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 DNAJC9Q8WXX5 260 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 TEX12Q9BXU0 123 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 TLNRD1Q9H1K6 362 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 OR51V1Q9H2C8 321 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 NOX4Q9NPH5 578 aa16.48■□□□□ 0.23
HPS4-213ENST00000483631 hCG_1807616A0A1W2PRN6 198 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 GSK3AP49840 483 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 IL13RA1P78552 427 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 IL5RAQ01344 420 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 ZNF826PQ6ZT77 177 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 FAM57BQ71RH2 274 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 TMEM179BQ7Z7N9 219 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 FAM90A1Q86YD7 464 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 C11orf53Q8IXP5 236 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 BOLLQ8N9W6 283 aaKnown RBP16.47■□□□□ 0.23
HPS4-213ENST00000483631 OR1M1Q8NGA1 313 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 OTULINQ96BN8 352 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 C12orf43Q96C57 262 aaKnown RBP16.47■□□□□ 0.23
HPS4-213ENST00000483631 MPC1Q9Y5U8 109 aa16.47■□□□□ 0.23
HPS4-213ENST00000483631 POM121CA8CG34 1229 aa16.46■□□□□ 0.23
HPS4-213ENST00000483631 E2F6O75461 281 aa16.46■□□□□ 0.23
HPS4-213ENST00000483631 MMP9P14780 707 aa16.46■□□□□ 0.23
HPS4-213ENST00000483631 EGR1P18146 543 aa16.46■□□□□ 0.23
HPS4-213ENST00000483631 POU1F1P28069 291 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms