RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 EIF3KQ9UBQ5 218 aaKnown RBP2.87□□□□□ -1.95
LRCH3-217ENST00000483442 CLN8Q9UBY8 286 aa2.87□□□□□ -1.95
LRCH3-217ENST00000483442 VPREB3Q9UKI3 123 aa2.87□□□□□ -1.95
LRCH3-217ENST00000483442 FBXL3Q9UKT7 428 aa2.87□□□□□ -1.95
LRCH3-217ENST00000483442 A4GNTQ9UNA3 340 aa2.87□□□□□ -1.95
LRCH3-217ENST00000483442 PPP1R3CQ9UQK1 317 aa2.87□□□□□ -1.95
LRCH3-217ENST00000483442 STK38LQ9Y2H1 464 aa2.87□□□□□ -1.95
LRCH3-217ENST00000483442 WDR45Q9Y484 360 aa2.87□□□□□ -1.95
LRCH3-217ENST00000483442 A0A1W2PRV1 198 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 IFNL4K9M1U5 179 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 SLC28A1O00337 649 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 EIF3HO15372 352 aaKnown RBP eCLIP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 ENSAO43768 121 aaKnown RBP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 ANGPTL7O43827 346 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 TIMM8AO60220 97 aaPredicted RBP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 SERPINI2O75830 405 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 MFN2O95140 757 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 AHSA1O95433 338 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 AK1P00568 194 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 PTHP01270 115 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 LIPFP07098 398 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 CD55P08174 381 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 LINC00032P0C843 101 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 MMP9P14780 707 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 UQCRBP14927 111 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 IL7RP16871 459 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 SDC1P18827 310 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 NCF2P19878 526 aaPredicted RBP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 AHCYP23526 432 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 CPT2P23786 658 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 APLNRP35414 380 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 SOAT1P35610 550 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 ACAA2P42765 397 aaKnown RBP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 CRATP43155 626 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 MAGEA4P43358 317 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 COPZ1P61923 177 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 HBA1P69905 142 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 SLC35A2P78381 396 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 PRB3Q04118 309 aaPredicted RBP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 METTL11BQ5VVY1 283 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 WDR25Q64LD2 544 aaPredicted RBP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 TMEM53Q6P2H8 277 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 TNFAIP8L2Q6P589 184 aaPredicted RBP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 WDR88Q6ZMY6 472 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 ZNF841Q6ZN19 808 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 TBC1D26Q86UD7 250 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 CALHM3Q86XJ0 350 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 PTOV1Q86YD1 416 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 ZNF101Q8IZC7 436 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 TMEM123Q8N131 208 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 LRRC18Q8N456 261 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 SPERTQ8NA61 448 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 RBM15BQ8NDT2 890 aaKnown RBP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 C19orf18Q8NEA5 215 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 OR2T6Q8NHC8 308 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 SETD6Q8TBK2 473 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 NSMAFQ92636 917 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 TAAR8Q969N4 342 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 ROPN1LQ96C74 230 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 RNF183Q96D59 192 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 MTERF3Q96E29 417 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 LRR1Q96L50 414 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 C3orf30Q96M34 536 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 OR5M11Q96RB7 305 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 NKX3-1Q99801 234 aaPredicted RBP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 SPXQ9BT56 116 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 TEX12Q9BXU0 123 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 ULBP2Q9BZM5 246 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 ZNF350Q9GZX5 532 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 DPH5Q9H2P9 285 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 EXOSC3Q9NQT5 275 aaKnown RBP2.86□□□□□ -1.95
LRCH3-217ENST00000483442 NINJ2Q9NZG7 142 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 TMEM216Q9P0N5 145 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 SLC17A7Q9P2U7 560 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 ATP6V1HQ9UI12 483 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 AURKCQ9UQB9 309 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 FIS1Q9Y3D6 152 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 CCL27Q9Y4X3 112 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 CAPN7Q9Y6W3 813 aa2.86□□□□□ -1.95
LRCH3-217ENST00000483442 IGLV5-52A0A0A0MRZ9 124 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 LOC102725191A0A1B0GVB3 256 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 C5orf49A4QMS7 147 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 NPIPB11E5RHQ5 1161 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 FTCDNL1E5RQL4 147 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 H3BUX3 64 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 FAAHO00519 579 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 AIM2O14862 343 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 SURF4O15260 269 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 PEX11AO75192 247 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 NPIPB7O75200 414 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 FARS2O95363 451 aaKnown RBP2.85□□□□□ -1.95
LRCH3-217ENST00000483442 CPSF4O95639 269 aaKnown RBP2.85□□□□□ -1.95
LRCH3-217ENST00000483442 SNAP29O95721 258 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 PAHP00439 452 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 HPRP00739 348 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 OPN1SWP03999 348 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 IFNW1P05000 195 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 FBP1P09467 338 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 PRG2P13727 222 aa2.85□□□□□ -1.95
LRCH3-217ENST00000483442 NQO1P15559 274 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms