RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 SSBP1Q04837 148 aaKnown RBP6.99□□□□□ -1.29
COL4A5-205ENST00000483338 SPEM2Q0P670 501 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF260Q3ZCT1 412 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 UNQ5815/PRO19632Q6UWF5 114 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 CYB561A3Q8NBI2 242 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 SLC26A10Q8NG04 563 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 OR5L1Q8NGL2 311 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 FBXO32Q969P5 355 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 SMIM3Q9BZL3 60 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 ATG10Q9H0Y0 220 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 RBKSQ9H477 322 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 MSRAQ9UJ68 235 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 PAM16Q9Y3D7 125 aa6.99□□□□□ -1.29
COL4A5-205ENST00000483338 COL4A4P53420 1690 aaPredicted RBP6.99□□□□□ -1.29
COL4A5-205ENST00000483338 IGHV2OR16-5A0A0B4J2B6 119 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 P2RX6O15547 441 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 CDC40O60508 579 aaKnown RBP eCLIP6.98□□□□□ -1.29
COL4A5-205ENST00000483338 RAMP2O60895 175 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 JTBO76095 146 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 FUT1P19526 365 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 CD33P20138 364 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 PRKAG1P54619 331 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 FXYD6P3P58550 94 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 TAS2R41P59536 307 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 CCL20P78556 96 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF763Q0D2J5 394 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 C1orf189Q5VU69 101 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 RPL22L1Q6P5R6 122 aaKnown RBP6.98□□□□□ -1.29
COL4A5-205ENST00000483338 NRMQ8IXM6 262 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 ARL14EPQ8N8R7 260 aaPredicted RBP6.98□□□□□ -1.29
COL4A5-205ENST00000483338 OR4D5Q8NGN0 318 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 SLC2A9Q9NRM0 540 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 SPTBP11277 2137 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 AQP7P3A6NL99 342 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF736B4DX44 427 aaPredicted RBP6.98□□□□□ -1.29
COL4A5-205ENST00000483338 OR6A2O95222 327 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 KNG1P01042 644 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 GAPDHP04406 335 aaKnown RBP6.98□□□□□ -1.29
COL4A5-205ENST00000483338 RGRP47804 291 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 PGFP49763 221 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 C17orf67Q0P5P2 114 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 TRIM61Q5EBN2 209 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF738Q8NE65 137 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 OR51D1Q8NGF3 324 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 MCHR2Q969V1 340 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 NEURL3Q96EH8 262 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 CD180Q99467 661 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 MAGT1Q9H0U3 335 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 MTIF3Q9H2K0 278 aaKnown RBP6.98□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF701Q9NV72 531 aaPredicted RBP6.98□□□□□ -1.29
COL4A5-205ENST00000483338 ZDHHC3Q9NYG2 299 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 GTF2A1LQ9UNN4 478 aa6.98□□□□□ -1.29
COL4A5-205ENST00000483338 DENND4CQ5VZ89 1909 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 TSPAN11A1L157 253 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 TRAPPC6AO75865 159 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 KLF8O95600 359 aaPredicted RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 SRP19P09132 144 aaKnown RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 SLC2A5P22732 501 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 RPL4P36578 427 aaKnown RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 BUD31P41223 144 aaPredicted RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 LSSP48449 732 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 COL9A2Q14055 689 aaPredicted RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 TAF9Q16594 264 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 SMIM21Q3B7S5 101 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 SLC22A6Q4U2R8 563 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 IER5LQ5T953 404 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF468Q5VIY5 522 aaPredicted RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 TEX43Q6ZNM6 134 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 SERPINA9Q86WD7 417 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 C9orf40Q8IXQ3 194 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 HS6ST3Q8IZP7 471 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 CYB561D1Q8N8Q1 229 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 GPR119Q8TDV5 335 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 BCL2L2Q92843 193 aaPredicted RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ACY3Q96HD9 319 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 OR10C1Q96KK4 312 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF552Q9H707 407 aaPredicted RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 SRD5A3Q9H8P0 318 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 TM7SF3Q9NS93 570 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 PRR13Q9NZ81 148 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 OR6C3Q9NZP0 311 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ST3GAL6Q9Y274 331 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 A0A1W2PQH9 124 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 RBFOX3A6NFN3 312 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 YPEL1O60688 119 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ACRP10323 421 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ENDOGQ14249 297 aaKnown RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 PRSS8Q16651 343 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 KRTCAP3Q53RY4 240 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 TOMM20LQ6UXN7 152 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF66Q6ZN08 573 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 FAM89BQ8N5H3 189 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 FAM216AQ8WUB2 273 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 TMEM239Q8WW34 195 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 TMEM234Q8WY98 164 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ZCCHC14Q8WYQ9 949 aaKnown RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 PINX1Q96BK5 328 aaKnown RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 MOB3AQ96BX8 217 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 LOXL4Q96JB6 756 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 YPEL2Q96QA6 119 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms