RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 THEM6Q8WUY1 208 aa8.73□□□□□ -1.01
CPSF4-212ENST00000482251 ZFAND2BQ8WV99 257 aa8.73□□□□□ -1.01
CPSF4-212ENST00000482251 RNF133Q8WVZ7 376 aa8.73□□□□□ -1.01
CPSF4-212ENST00000482251 TAF15Q92804 592 aaKnown RBP eCLIP8.73□□□□□ -1.01
CPSF4-212ENST00000482251 SLC7A6OSQ96CW6 309 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-212ENST00000482251 PGAM5Q96HS1 289 aa8.73□□□□□ -1.01
CPSF4-212ENST00000482251 ZNF48Q96MX3 618 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-212ENST00000482251 NUDT16L1Q9BRJ7 211 aaKnown RBP8.73□□□□□ -1.01
CPSF4-212ENST00000482251 PAPOLGQ9BWT3 736 aaKnown RBP8.73□□□□□ -1.01
CPSF4-212ENST00000482251 MS4A7Q9GZW8 240 aaPredicted RBP8.73□□□□□ -1.01
CPSF4-212ENST00000482251 SLC22A4Q9H015 551 aa8.73□□□□□ -1.01
CPSF4-212ENST00000482251 ZNF556Q9HAH1 456 aa8.73□□□□□ -1.01
CPSF4-212ENST00000482251 SMURF1Q9HCE7 757 aa8.73□□□□□ -1.01
CPSF4-212ENST00000482251 MRPL15Q9P015 296 aaKnown RBP8.73□□□□□ -1.01
CPSF4-212ENST00000482251 ZNF319Q9P2F9 582 aa8.73□□□□□ -1.01
CPSF4-212ENST00000482251 RNF7Q9UBF6 113 aa8.73□□□□□ -1.01
CPSF4-212ENST00000482251 NOP16Q9Y3C1 178 aaKnown RBP8.73□□□□□ -1.01
CPSF4-212ENST00000482251 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-212ENST00000482251 hCG_38984A0A1B0GV85 526 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 OOEPA6NGQ2 149 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 LGALS8O00214 317 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 PSMD9O00233 223 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 PHYHO14832 338 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 ADAM20O43506 726 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 GMDSO60547 372 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 TIPRLO75663 272 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 DNAJC8O75937 253 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-212ENST00000482251 LYNP07948 512 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 OSMP13725 252 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 OPRL1P41146 370 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 HCCSP53701 268 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 GMFBP60983 142 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 FGF12P61328 243 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 ELF3P78545 371 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-212ENST00000482251 PAX8Q06710 450 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 GK3PQ14409 553 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 LRRN1Q6UXK5 716 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 BRD3OSQ6XYD6 125 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 PRSS45Q7RTY3 260 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 CPOQ8IVL8 374 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 RAB40AQ8WXH6 277 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 ERGIC1Q969X5 290 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 SPSB4Q96A44 273 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 DACT3Q96B18 629 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-212ENST00000482251 SGK3Q96BR1 496 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 C1orf147Q96MC9 270 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-212ENST00000482251 OR10A2Q9H208 303 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 RASSF4Q9H2L5 321 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 TOR3AQ9H497 397 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 OPA3Q9H6K4 179 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 POMPQ9Y244 141 aa8.72□□□□□ -1.01
CPSF4-212ENST00000482251 A0A1B0GW55 424 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 TCRBV3S1A0A5B6 114 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 SFTPBP07988 381 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 DUX4L2P0CJ85 424 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 DUX4L3P0CJ86 424 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 DUX4L4P0CJ87 422 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 DUX4L5P0CJ88 424 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 DUX4L6P0CJ89 424 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 DUX4L7P0CJ90 424 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 GNALP38405 381 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 PSMB10P40306 273 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 GSK3AP49840 483 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 CDK5Q00535 292 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 BAMBIQ13145 260 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 APOFQ13790 326 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 RUSC1-AS1Q66K80 236 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 DUX4L9Q6RFH8 374 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-212ENST00000482251 ZNF841Q6ZN19 808 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 DOK3Q7L591 496 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 SHFQ7M4L6 423 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 FAM90A1Q86YD7 464 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-212ENST00000482251 FGFRL1Q8N441 504 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 GCSAMQ8N6F7 178 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 C3orf56Q8N813 242 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 OTOSQ8NHW6 89 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 LRRC29Q8WV35 223 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 UPRTQ96BW1 309 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 SEH1LQ96EE3 360 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 PCGF1Q9BSM1 259 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 YY1AP1Q9H869 796 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 NTN4Q9HB63 628 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 TNFRSF19Q9NS68 423 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 C14orf119Q9NWQ9 140 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 TVP23BQ9NYZ1 205 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 DNAJB9Q9UBS3 223 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 DUX4Q9UBX2 424 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 RHBDD3Q9Y3P4 386 aa8.71□□□□□ -1.02
CPSF4-212ENST00000482251 TRAV38-1A0A0B4J264 116 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 TMEM89A2RUT3 159 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 TMPRSS2O15393 492 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 PRODHO43272 600 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 ENSAO43768 121 aaKnown RBP8.7□□□□□ -1.02
CPSF4-212ENST00000482251 FCN3O75636 299 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 FSTL3O95633 263 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 PTBP3O95758 552 aaKnown RBP8.7□□□□□ -1.02
CPSF4-212ENST00000482251 TFF1P04155 84 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 HMGN1P05114 100 aa8.7□□□□□ -1.02
CPSF4-212ENST00000482251 ANXA8P13928 327 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms