RNA–Protein interactions for RNA: ENST00000480686.5

RNF220-213, Transcript of ring finger protein 220, human

TSL 2

Gene RNF220, Length 3,835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF220-213	ENST00000480686	IFNA5	P01569	189 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	DUSP2	Q05923	314 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	VAMP3	Q15836	100 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	PNLIPRP3	Q17RR3	467 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	THEM4	Q5T1C6	240 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	OR10A7	Q8NGE5	316 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	SCGB1C1	Q8TD33	95 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	HIST1H2AA	Q96QV6	131 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	KLF16	Q9BXK1	252 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	SLC5A7	Q9GZV3	580 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	FOXJ2	Q9P0K8	574 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF220-213	ENST00000480686		E5RGE8	158 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	TGM5	O43548	720 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	RPLP2	P05387	115 aa	Known RBP	11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	FCAR	P24071	287 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	SLC11A1	P49279	550 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	CSNK1G2	P78368	415 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	JOSD1	Q15040	202 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	TESK1	Q15569	626 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	RERG	Q96A58	199 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	SDSL	Q96GA7	329 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	AQP10	Q96PS8	301 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	TBX15	Q96SF7	602 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	PRSS27	Q9BQR3	290 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	NSG2	Q9Y328	171 aa		11.42	□□□□□ -0.58
RNF220-213	ENST00000480686	DVL1	O14640	695 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	NXPH3	O95157	252 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	TFPI2	P48307	235 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	MFGE8	Q08431	387 aa	Predicted RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	ABHD17C	Q6PCB6	329 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	C1orf198	Q9H425	327 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	RBM7	Q9Y580	266 aa	Known RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	SOX1	O00570	391 aa	Predicted RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	MMP16	P51512	607 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	MRPL58	Q14197	206 aa	Known RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	ZNF266	Q14584	549 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	OR6X1	Q8NH79	312 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	FAHD2A	Q96GK7	314 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	TOX2	Q96NM4	488 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686		K7ESM1	405 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	CDKN2A	P42771	156 aa	Known RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	SNU13	P55769	128 aa	Known RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	ZP2	Q05996	745 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	PRDX1	Q06830	199 aa	Known RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	PHLDA2	Q53GA4	152 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	WDR25	Q64LD2	544 aa	Predicted RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	MCEMP1	Q8IX19	187 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	OR1P1	Q8NH06	330 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	C4orf45	Q96LM5	186 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	MFRP	Q9BY79	579 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686	SDK1	Q7Z5N4	2213 aa		11.41	□□□□□ -0.58
RNF220-213	ENST00000480686		A0A1W2PRU2	124 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	ST8SIA3	O43173	380 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	GCG	P01275	180 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	HPN	P05981	417 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	ZNF888	P0CJ79	500 aa	Predicted RBP	11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	CPM	P14384	443 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	TIMP2	P16035	220 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	ZNF136	P52737	540 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	SCAND1	P57086	179 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	BTNL3	Q6UXE8	466 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	PHOSPHO2	Q8TCD6	241 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	RPUSD4	Q96CM3	377 aa	Known RBP	11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	C5orf34	Q96MH7	638 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	VAMP8	Q9BV40	100 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	TMEM59	Q9BXS4	323 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	CHST11	Q9NPF2	352 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	SERINC1	Q9NRX5	453 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	FUT9	Q9Y231	359 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	KLHDC2	Q9Y2U9	406 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	INSL5	Q9Y5Q6	135 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	HBE1	P02100	147 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	GNRHR	P30968	328 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	PMEL	P40967	661 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	ERVFC1-1	P60608	527 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	SLC16A14	Q7RTX9	510 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	ZNF709	Q8N972	641 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	OR2AJ1	Q8NGZ0	328 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	MUCL1	Q96DR8	90 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	TP53RK	Q96S44	253 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	FAAP24	Q9BTP7	215 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	SLC17A5	Q9NRA2	495 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686	HDGFL3	Q9Y3E1	203 aa		11.4	□□□□□ -0.58
RNF220-213	ENST00000480686		A0A1W2PNV4	684 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	SERPINA7	P05543	415 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	HKR1	P10072	659 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	FAM3A	P98173	230 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	REEP5	Q00765	189 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	ELOB	Q15370	118 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	CDKN3	Q16667	212 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	ARHGAP11B	Q3KRB8	267 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	OGFOD3	Q6PK18	319 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	C1QL4	Q86Z23	238 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	OR5R1	Q8NH85	324 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	SLC22A18	Q96BI1	424 aa		11.4	□□□□□ -0.59
RNF220-213	ENST00000480686	REEP6	Q96HR9	211 aa		11.4	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms