RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SETD9Q8NE22 299 aa5.85□□□□□ -1.47
BRCA1-215ENST00000478531 OR2T27Q8NH04 317 aa5.85□□□□□ -1.47
BRCA1-215ENST00000478531 OR51E1Q8TCB6 317 aa5.85□□□□□ -1.47
BRCA1-215ENST00000478531 SGK3Q96BR1 496 aa5.85□□□□□ -1.47
BRCA1-215ENST00000478531 LGALS12Q96DT0 336 aa5.85□□□□□ -1.47
BRCA1-215ENST00000478531 DIRC2Q96SL1 478 aa5.85□□□□□ -1.47
BRCA1-215ENST00000478531 SLC30A2Q9BRI3 323 aa5.85□□□□□ -1.47
BRCA1-215ENST00000478531 SOX7Q9BT81 388 aa5.85□□□□□ -1.47
BRCA1-215ENST00000478531 PBOV1Q9GZY1 135 aa5.85□□□□□ -1.47
BRCA1-215ENST00000478531 GSX1Q9H4S2 264 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-215ENST00000478531 ACOXLQ9NUZ1 547 aa5.85□□□□□ -1.47
BRCA1-215ENST00000478531 ANK3Q12955 4377 aaKnown RBP5.85□□□□□ -1.47
BRCA1-215ENST00000478531 JMJD1CQ15652 2540 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 CUBNO60494 3623 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 NAV3Q8IVL0 2385 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 IGHV4-61A0A0C4DH41 118 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 ISPDA4D126 451 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 LRP5LA4QPB2 252 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 METTL15A6NJ78 407 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 ANKRD30BLA7E2S9 258 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 CLDN25C9JDP6 229 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 H3BSH0 61 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 WBP4O75554 376 aaKnown RBP5.84□□□□□ -1.47
BRCA1-215ENST00000478531 RP2O75695 350 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 PNPP00491 289 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 ADH4P08319 380 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 TNFRSF1AP19438 455 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 USF1P22415 310 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-215ENST00000478531 CFL1P23528 166 aaKnown RBP5.84□□□□□ -1.47
BRCA1-215ENST00000478531 CRYBB2P43320 205 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 GSK3AP49840 483 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 ACTC1P68032 377 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 ACTA1P68133 377 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 ADARB1P78563 741 aaKnown RBP5.84□□□□□ -1.47
BRCA1-215ENST00000478531 MVKQ03426 396 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 ZNF85Q03923 595 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 RIN1Q13671 783 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 C6orf52Q5T4I8 152 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 AVPI1Q5T686 147 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 CLEC9AQ6UXN8 241 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 C8orf59Q8N0T1 100 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-215ENST00000478531 ZNF540Q8NDQ6 660 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 PPP1R14AQ96A00 147 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 SPSB4Q96A44 273 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 FAM71F1Q96KD3 344 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-215ENST00000478531 MEGF10Q96KG7 1140 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 LYZL4Q96KX0 146 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 PAPOLGQ9BWT3 736 aaKnown RBP5.84□□□□□ -1.47
BRCA1-215ENST00000478531 DCAF16Q9NXF7 216 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 MRPL15Q9P015 296 aaKnown RBP5.84□□□□□ -1.47
BRCA1-215ENST00000478531 IL19Q9UHD0 177 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 PPP1R3CQ9UQK1 317 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 RPL36Q9Y3U8 105 aaKnown RBP5.84□□□□□ -1.47
BRCA1-215ENST00000478531 R4GMQ9 66 aa5.84□□□□□ -1.47
BRCA1-215ENST00000478531 FN1P02751 2386 aaKnown RBP5.84□□□□□ -1.48
BRCA1-215ENST00000478531 A0A096LNT2 108 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 A6NJY4 79 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 VWC2LB2RUY7 222 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 ATP6V1G2O95670 118 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 FADS2O95864 444 aaKnown RBP5.84□□□□□ -1.48
BRCA1-215ENST00000478531 CD55P08174 381 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 FOSL1P15407 271 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 ACKR3P25106 362 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 GIFP27352 417 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 PSMB10P40306 273 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 SRP9P49458 86 aaKnown RBP5.84□□□□□ -1.48
BRCA1-215ENST00000478531 MRPS11P82912 194 aaKnown RBP5.84□□□□□ -1.48
BRCA1-215ENST00000478531 PRAMEF6Q5VXH4 476 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 LIPNQ5VXI9 398 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 BIVMQ86UB2 503 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 LHFPL3Q86UP9 236 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 MOGAT3Q86VF5 341 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 ACBD7Q8N6N7 88 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 OR8S1Q8NH09 359 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF420Q8TAQ5 688 aaPredicted RBP5.84□□□□□ -1.48
BRCA1-215ENST00000478531 SIGLEC11Q96RL6 698 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 ALG8Q9BVK2 526 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 VCX3BQ9H321 246 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 RGCCQ9H4X1 137 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 MOB1AQ9H8S9 216 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 G6PC2Q9NQR9 355 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 GPR84Q9NQS5 396 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 UFSP2Q9NUQ7 469 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 NUFIP1Q9UHK0 495 aaKnown RBP5.84□□□□□ -1.48
BRCA1-215ENST00000478531 OR52A1Q9UKL2 312 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 MYRFQ9Y2G1 1151 aa5.84□□□□□ -1.48
BRCA1-215ENST00000478531 DOCK11Q5JSL3 2073 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 A0A0U1RQV5 110 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 H0YAE9 185 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 J3QLW9 94 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 J3QRE1 110 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 P2RY10O00398 339 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 WNT9BO14905 357 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 SRSF10O75494 262 aaKnown RBP5.83□□□□□ -1.48
BRCA1-215ENST00000478531 LY6G6DO95868 133 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 TTRP02766 147 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF19P17023 458 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 IL2RGP31785 369 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 DCTDP32321 178 aa5.83□□□□□ -1.48
BRCA1-215ENST00000478531 MMP16P51512 607 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms