RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ACOXLQ9NUZ1 547 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 GNG8Q9UK08 70 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 R4GMQ9 66 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 ARFGEF3Q5TH69 2177 aa8.7□□□□□ -1.02
HDAC6-222ENST00000478095 DAPL1A0PJW8 107 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 LRP5LA4QPB2 252 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 METTL15A6NJ78 407 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 LOC110117498-PIK3R3F6TDL0 507 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 J3QRE1 110 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 SRSF10O75494 262 aaKnown RBP8.69□□□□□ -1.02
HDAC6-222ENST00000478095 FOSL1P15407 271 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 GIFP27352 417 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 DCTDP32321 178 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 PSMB10P40306 273 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 GSK3AP49840 483 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 ACTC1P68032 377 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 ACTA1P68133 377 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 MRPS11P82912 194 aaKnown RBP8.69□□□□□ -1.02
HDAC6-222ENST00000478095 MVKQ03426 396 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 OR8G1Q15617 311 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 ODF4Q2M2E3 257 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 HFEQ30201 348 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 C6orf52Q5T4I8 152 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF684Q5T5D7 378 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 BCL2L15Q5TBC7 163 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 LIPNQ5VXI9 398 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 CLEC9AQ6UXN8 241 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 SETD9Q8NE22 299 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF420Q8TAQ5 688 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-222ENST00000478095 OR51E1Q8TCB6 317 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 FAM71F1Q96KD3 344 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-222ENST00000478095 MEGF10Q96KG7 1140 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 SIGLEC11Q96RL6 698 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 RGCCQ9H4X1 137 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 IL19Q9UHD0 177 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 NUFIP1Q9UHK0 495 aaKnown RBP8.69□□□□□ -1.02
HDAC6-222ENST00000478095 SLC22A13Q9Y226 551 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 EXOGQ9Y2C4 368 aaKnown RBP8.69□□□□□ -1.02
HDAC6-222ENST00000478095 MYRFQ9Y2G1 1151 aa8.69□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF469Q96JG9 3925 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-222ENST00000478095 MAP1AP78559 2803 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-222ENST00000478095 ANKRD30BLA7E2S9 258 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 CLDN25C9JDP6 229 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 H0YAE9 185 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 H3BSH0 61 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 WNT9BO14905 357 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 SULT1C4O75897 302 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 ATP6V1G2O95670 118 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 LY6G6DO95868 133 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 TTRP02766 147 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 VSIG8P0DPA2 414 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 TNFRSF1AP19438 455 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 CFL1P23528 166 aaKnown RBP8.68□□□□□ -1.02
HDAC6-222ENST00000478095 ACKR3P25106 362 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 IL2RGP31785 369 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 SRP9P49458 86 aaKnown RBP8.68□□□□□ -1.02
HDAC6-222ENST00000478095 ISL1P61371 349 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 LOXL1Q08397 574 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-222ENST00000478095 MAB21L1Q13394 359 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 OR8B8Q15620 311 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 PRAMEF6Q5VXH4 476 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 FAM220AQ7Z4H9 259 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 BIVMQ86UB2 503 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 LHFPL3Q86UP9 236 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 MOGAT3Q86VF5 341 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 C8orf59Q8N0T1 100 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-222ENST00000478095 ACBD7Q8N6N7 88 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF540Q8NDQ6 660 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 OR52I1Q8NGK6 324 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 RORBQ92753 470 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 TFAP2CQ92754 450 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 C4orf36Q96KX1 117 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 PAPOLGQ9BWT3 736 aaKnown RBP8.68□□□□□ -1.02
HDAC6-222ENST00000478095 MOB1AQ9H8S9 216 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 G6PC2Q9NQR9 355 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 GPR84Q9NQS5 396 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 TMEM106BQ9NUM4 274 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 MRPL15Q9P015 296 aaKnown RBP8.68□□□□□ -1.02
HDAC6-222ENST00000478095 OR52A1Q9UKL2 312 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 PPP1R3CQ9UQK1 317 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 RHBDD3Q9Y3P4 386 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 RPL36Q9Y3U8 105 aaKnown RBP8.68□□□□□ -1.02
HDAC6-222ENST00000478095 WIPI2Q9Y4P8 454 aa8.68□□□□□ -1.02
HDAC6-222ENST00000478095 A0A0U1RQV5 110 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 A0A1B0GWJ7 208 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 ISPDA4D126 451 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 ACOD1A6NK06 481 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 J3QLW9 94 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 P2RY10O00398 339 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 FAM20BO75063 409 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 FADS2O95864 444 aaKnown RBP8.67□□□□□ -1.02
HDAC6-222ENST00000478095 IGHA1P01876 353 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 ACANP16112 2415 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF19P17023 458 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 FLNAP21333 2647 aaKnown RBP8.67□□□□□ -1.02
HDAC6-222ENST00000478095 GNALP38405 381 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 DDOSTP39656 456 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 TMEM33P57088 247 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 OR12D2P58182 307 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms