RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 OR10A2Q9H208 303 aa18.19■□□□□ 0.5
COL9A3-211ENST00000477612 OCEL1Q9H607 264 aa18.19■□□□□ 0.5
COL9A3-211ENST00000477612 UFSP2Q9NUQ7 469 aa18.19■□□□□ 0.5
COL9A3-211ENST00000477612 DNAJC27Q9NZQ0 273 aa18.19■□□□□ 0.5
COL9A3-211ENST00000477612 RNF7Q9UBF6 113 aa18.19■□□□□ 0.5
COL9A3-211ENST00000477612 CCDC182A6NF36 153 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 ANKRD30BLA7E2S9 258 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 FCGR1AP12314 374 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 RPS2P15880 293 aaKnown RBP18.18■□□□□ 0.5
COL9A3-211ENST00000477612 ADRA2CP18825 462 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 NAA10P41227 235 aaPredicted RBP18.18■□□□□ 0.5
COL9A3-211ENST00000477612 RPS7P62081 194 aaKnown RBP18.18■□□□□ 0.5
COL9A3-211ENST00000477612 OR8B8Q15620 311 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 TUSC1Q2TAM9 212 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 SLX4IPQ5VYV7 408 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 ASRGL1Q7L266 308 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 ZDHHC13Q8IUH4 622 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 SEMA6DQ8NFY4 1073 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 ZFAND2BQ8WV99 257 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 PGAM5Q96HS1 289 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 PRRG3Q9BZD7 231 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 KRT84Q9NSB2 600 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 C14orf119Q9NWQ9 140 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 KLHDC2Q9Y2U9 406 aa18.18■□□□□ 0.5
COL9A3-211ENST00000477612 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-211ENST00000477612 ZAR1LA6NP61 321 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 TNFRSF13BO14836 293 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-211ENST00000477612 VENTXO95231 258 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 DCTDP32321 178 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 PSMB10P40306 273 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 GSK3AP49840 483 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 PAX8Q06710 450 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 SNCBQ16143 134 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 C12orf73Q69YU5 71 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 KRT74Q7RTS7 529 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 CSNK2A3Q8NEV1 391 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 ZNF418Q8TF45 676 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-211ENST00000477612 DVL3Q92997 716 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-211ENST00000477612 ITFG2Q969R8 447 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 ZNF391Q9UJN7 358 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 LAMP5Q9UJQ1 280 aa18.17■□□□□ 0.5
COL9A3-211ENST00000477612 ACOD1A6NK06 481 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 PRKYO43930 277 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 MITFO75030 526 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-211ENST00000477612 LHBP01229 141 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 PPIAL4GP0DN37 164 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 EPHA2P29317 976 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 PSMA6P60900 246 aaKnown RBP18.16■□□□□ 0.5
COL9A3-211ENST00000477612 GNB2P62879 340 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 LCN1P1Q5VSP4 162 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 KCTD18Q6PI47 426 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-211ENST00000477612 LRRN1Q6UXK5 716 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 ZNF841Q6ZN19 808 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 AMIGO2Q86SJ2 522 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 OR8B3Q8NGG8 313 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 LRTOMTQ8WZ04 291 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 OR8B2Q96RD0 313 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 BRD7Q9NPI1 651 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 OR5V1Q9UGF6 321 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 ENOPH1Q9UHY7 261 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 LRP12Q9Y561 859 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 AUP1Q9Y679 476 aa18.16■□□□□ 0.5
COL9A3-211ENST00000477612 LGALS8O00214 317 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 HCCSP53701 268 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 HILS1P60008 231 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 ROM1Q03395 351 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 KCNJ8Q15842 424 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 AADACL4Q5VUY2 407 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 NXNL2Q5VZ03 156 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 LYPD2Q6UXB3 125 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 NLRC3Q7RTR2 1065 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 C11orf53Q8IXP5 236 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 GCSAMQ8N6F7 178 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 RNPEPL1Q9HAU8 725 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 TRIM36Q9NQ86 728 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 TMEM14AQ9Y6G1 99 aa18.15■□□□□ 0.5
COL9A3-211ENST00000477612 PHYHO14832 338 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 NDUFA2O43678 99 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 ZNF254O75437 659 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 GRPP07492 148 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 CD80P33681 288 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 PITPNBP48739 271 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 NPY4RP50391 375 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 WDR25Q64LD2 544 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-211ENST00000477612 MEPCEQ7L2J0 689 aaKnown RBP18.14■□□□□ 0.49
COL9A3-211ENST00000477612 KRT77Q7Z794 578 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 WDR86Q86TI4 376 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 FTMTQ8N4E7 242 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 OR8S1Q8NH09 359 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 TMEM163Q8TC26 289 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 RAB40AQ8WXH6 277 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 CENPNQ96H22 339 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-211ENST00000477612 LYZL4Q96KX0 146 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 MRI1Q9BV20 369 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 C1orf123Q9NWV4 160 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 HAO2Q9NYQ3 351 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 RHBDD3Q9Y3P4 386 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 MPC1Q9Y5U8 109 aa18.14■□□□□ 0.49
COL9A3-211ENST00000477612 TRAV38-1A0A0B4J264 116 aa18.13■□□□□ 0.49
COL9A3-211ENST00000477612 IGHV2-70DA0A0C4DH43 119 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms